Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 MKI67P1-201ENST00000604297 1460 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 RNA5SP448-201ENST00000363151 111 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 RPL7-203ENST00000396466 762 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 PTMAP8-201ENST00000397729 342 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 OR2W4P-201ENST00000406496 926 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC231533.2-201ENST00000419045 978 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL390840.1-201ENST00000420303 988 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 LDHAP2-201ENST00000437325 985 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC117395.2-201ENST00000463122 1128 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC131233.1-201ENST00000479200 955 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC093827.1-201ENST00000480094 861 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 OR7E154P-201ENST00000525174 932 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL049869.4-201ENST00000555669 178 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ULK4P1-202ENST00000565174 503 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 OR7E94P-202ENST00000601375 790 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL031429.2-201ENST00000602605 649 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC117490.2-201ENST00000610042 594 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC135050.6-202ENST00000613584 392 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL352984.2-202ENST00000613699 155 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 BX005195.1-201ENST00000618097 1198 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL162233.1-201ENST00000620014 944 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC021422.1-201ENST00000621212 473 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC061975.5-201ENST00000584928 1441 ntBASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNX18Q96RF0 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.48□□□□□ -1.37
SNX18Q96RF0 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 WASF5P-205ENST00000428639 1455 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC020978.6-201ENST00000571197 3177 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNX18Q96RF0 RNA5SP260-201ENST00000363849 111 ntBASIC6.47□□□□□ -1.37
SNX18Q96RF0 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SNX18Q96RF0 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms