Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL353622.1-201ENST00000604716 1945 ntBASIC7.9□□□□□ -1.15
SHKBP1Q8TBC3 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC019072.1-201ENST00000604535 1551 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 WASF5P-205ENST00000428639 1455 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RBMX2P2-201ENST00000257020 946 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 SSX6-201ENST00000376932 562 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 OR7E156P-201ENST00000400303 464 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 NUS1P4-201ENST00000401550 585 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 ZNF37CP-201ENST00000406795 241 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AMZ2P2-201ENST00000406819 1057 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RPSAP72-201ENST00000407020 358 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 SNORA81-201ENST00000408493 178 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 SNORA11D-201ENST00000408548 128 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 SNORA11E-201ENST00000408778 128 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC004986.1-201ENST00000414855 607 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 MARK2P12-201ENST00000420129 585 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 ARL4AP3-201ENST00000441452 574 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 GTF2F2P2-201ENST00000445825 721 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 EXTL2P1-201ENST00000446218 416 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC114928.1-201ENST00000446516 415 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC004022.1-201ENST00000447766 1066 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AL359385.1-201ENST00000456509 365 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RPS4XP19-201ENST00000460237 736 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RN7SL776P-201ENST00000493390 268 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC105391.1-201ENST00000503155 1045 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC116353.3-201ENST00000511215 249 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 DUXAP6-201ENST00000553858 601 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 MTCYBP23-201ENST00000558717 1102 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC090888.3-201ENST00000558917 509 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 OR4C49P-201ENST00000563891 900 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC005244.1-201ENST00000582566 339 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AL136139.1-201ENST00000605568 222 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC107952.2-201ENST00000606048 486 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC087241.4-201ENST00000612441 480 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC008759.3-201ENST00000613300 508 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RN7SL680P-201ENST00000620379 299 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 METAP1-212ENST00000625963 147 ntTSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC099654.15-201ENST00000639802 509 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC105046.1-201ENST00000566457 4997 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AL035555.1-201ENST00000404462 1790 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC008937.3-201ENST00000606813 1700 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AC138627.1-203ENST00000641872 1680 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 AL096816.1-201ENST00000623300 2920 ntBASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
SHKBP1Q8TBC3 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 AP002364.1-201ENST00000623330 3386 ntBASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 AL358913.2-201ENST00000553881 1548 ntBASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 AC011503.2-201ENST00000594230 1500 ntBASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 AL161891.1-201ENST00000621575 4636 ntBASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 RBBP4P4-201ENST00000398588 1289 ntBASIC7.88□□□□□ -1.15
SHKBP1Q8TBC3 AL358178.1-201ENST00000407698 397 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 347.3 ms