Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS13CQ709C8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 AC092017.2-201ENST00000427600 362 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 BX323845.3-201ENST00000428215 527 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 CRYGGP-201ENST00000443337 145 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 RPS29P22-201ENST00000472363 168 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 EIF3LP3-201ENST00000495197 822 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 CDH12P4-201ENST00000517835 295 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 CDH12P3-201ENST00000517935 295 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 CDH12P1-201ENST00000518435 295 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS13CQ709C8 AP005139.1-201ENST00000580702 1647 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS13CQ709C8 RPGR-203ENST00000378505 4767 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS13CQ709C8 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
VPS13CQ709C8 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VPS13CQ709C8 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC5.22□□□□□ -1.57
VPS13CQ709C8 AL136531.3-201ENST00000624378 3658 ntBASIC5.22□□□□□ -1.57
VPS13CQ709C8 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS13CQ709C8 RN7SKP115-201ENST00000363177 317 ntBASIC5.21□□□□□ -1.57
VPS13CQ709C8 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.21□□□□□ -1.57
VPS13CQ709C8 RPL23AP85-201ENST00000421838 433 ntBASIC5.21□□□□□ -1.57
VPS13CQ709C8 AL590762.4-201ENST00000425885 253 ntBASIC5.21□□□□□ -1.57
VPS13CQ709C8 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.21□□□□□ -1.57
VPS13CQ709C8 AL445665.1-202ENST00000452436 324 ntBASIC5.21□□□□□ -1.57
VPS13CQ709C8 RPL35AP28-201ENST00000459730 331 ntBASIC5.21□□□□□ -1.57
VPS13CQ709C8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.21□□□□□ -1.57
VPS13CQ709C8 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.21□□□□□ -1.57
VPS13CQ709C8 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS13CQ709C8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VPS13CQ709C8 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC5.21□□□□□ -1.57
VPS13CQ709C8 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS13CQ709C8 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS13CQ709C8 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
VPS13CQ709C8 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
VPS13CQ709C8 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 RPL21P133-201ENST00000443666 476 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC073850.1-201ENST00000449243 255 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 MRPS5P4-201ENST00000592830 325 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC018809.2-201ENST00000602436 3823 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC026951.2-201ENST00000613847 241 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 OR6C66P-203ENST00000641469 4627 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 RNA5SP375-201ENST00000362975 119 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 RN7SKP77-201ENST00000363261 353 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 PSMD10P3-201ENST00000437000 448 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 SUMO2P10-201ENST00000452006 288 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC021269.1-201ENST00000526860 705 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 OR4A13P-201ENST00000529316 942 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC087575.1-201ENST00000585087 229 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC026367.2-201ENST00000610630 553 ntBASIC5.21□□□□□ -1.58
VPS13CQ709C8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VPS13CQ709C8 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC5.21□□□□□ -1.58
VPS13CQ709C8 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL591767.3-201ENST00000554632 525 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 MIR3691-201ENST00000578066 90 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AP005119.1-201ENST00000580956 292 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL136131.3-201ENST00000607600 188 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms