Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC131233.1-201ENST00000479200 955 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 OR52A4P-202ENST00000481634 799 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AL591122.1-201ENST00000487348 492 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 RPS10P20-201ENST00000494130 463 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 FTH1P8-201ENST00000498161 514 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC5.61□□□□□ -1.51
CX3CL1P78423 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.61□□□□□ -1.51
CX3CL1P78423 RPS23-208ENST00000512493 443 ntTSL 3 BASIC5.61□□□□□ -1.51
CX3CL1P78423 RNU6-943P-201ENST00000516960 98 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC5.61□□□□□ -1.51
CX3CL1P78423 AP001803.1-201ENST00000525668 147 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AC079866.1-201ENST00000534985 1220 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 ULK4P1-202ENST00000565174 503 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC5.61□□□□□ -1.51
CX3CL1P78423 AC010463.3-201ENST00000594077 500 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AL683813.2-201ENST00000605245 502 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC5.61□□□□□ -1.51
CX3CL1P78423 AC063962.1-201ENST00000608199 521 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AL031777.2-201ENST00000611953 196 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AL161931.1-201ENST00000612768 246 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AC097641.3-201ENST00000613523 464 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 AC004943.1-203ENST00000624370 1074 ntBASIC5.61□□□□□ -1.51
CX3CL1P78423 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC5.61□□□□□ -1.51
CX3CL1P78423 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CX3CL1P78423 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 THAP12P8-201ENST00000447914 2115 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.6□□□□□ -1.51
CX3CL1P78423 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 AL359694.2-201ENST00000567753 1615 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.6□□□□□ -1.51
CX3CL1P78423 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 C1D-202ENST00000407324 1379 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CX3CL1P78423 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AL589994.1-201ENST00000404962 340 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC5.6□□□□□ -1.51
CX3CL1P78423 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.6□□□□□ -1.51
CX3CL1P78423 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 HMGN1P6-201ENST00000438508 291 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 OR6C72P-201ENST00000451403 892 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 MTND3P4-201ENST00000453537 303 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 TUBBP11-201ENST00000472255 252 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 RPL23AP8-201ENST00000479812 475 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 DEFB109A-201ENST00000482450 265 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 RPS4XP23-201ENST00000487801 237 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 TECRP2-201ENST00000503270 928 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 SCARNA6-201ENST00000515982 265 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AC087272.1-201ENST00000523624 533 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 SNRPGP1-201ENST00000553864 222 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC004232.2-201ENST00000574245 821 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC096708.2-201ENST00000577676 512 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC011193.2-201ENST00000582638 367 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 AC107993.1-201ENST00000591343 684 ntBASIC5.6□□□□□ -1.51
CX3CL1P78423 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC012511.1-201ENST00000608140 449 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms