Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SSR1P43307 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 SNORA70.5-201ENST00000365519 135 ntBASIC7.32□□□□□ -1.24
SSR1P43307 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SSR1P43307 AC090114.1-201ENST00000393266 448 ntBASIC7.32□□□□□ -1.24
SSR1P43307 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 CYP4F34P-201ENST00000425951 481 ntBASIC7.32□□□□□ -1.24
SSR1P43307 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 AL604028.2-201ENST00000437848 788 ntBASIC7.32□□□□□ -1.24
SSR1P43307 DNAJC19P5-201ENST00000443295 316 ntBASIC7.32□□□□□ -1.24
SSR1P43307 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC7.32□□□□□ -1.24
SSR1P43307 PSMA6P2-201ENST00000457574 686 ntBASIC7.32□□□□□ -1.24
SSR1P43307 SNORA35.1-201ENST00000458908 128 ntBASIC7.32□□□□□ -1.24
SSR1P43307 RN7SL259P-201ENST00000478499 253 ntBASIC7.32□□□□□ -1.24
SSR1P43307 AC096743.1-201ENST00000485172 319 ntBASIC7.32□□□□□ -1.24
SSR1P43307 RPL5P11-201ENST00000498068 893 ntBASIC7.32□□□□□ -1.24
SSR1P43307 RNA5SP518-201ENST00000515957 119 ntBASIC7.32□□□□□ -1.24
SSR1P43307 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 AC024614.1-201ENST00000577546 307 ntBASIC7.32□□□□□ -1.24
SSR1P43307 MIR4258-201ENST00000580920 91 ntBASIC7.32□□□□□ -1.24
SSR1P43307 GTF2IP6-201ENST00000583143 541 ntBASIC7.32□□□□□ -1.24
SSR1P43307 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 AC026951.2-201ENST00000613847 241 ntBASIC7.32□□□□□ -1.24
SSR1P43307 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.32□□□□□ -1.24
SSR1P43307 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.32□□□□□ -1.24
SSR1P43307 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC7.32□□□□□ -1.24
SSR1P43307 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SSR1P43307 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SSR1P43307 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.31□□□□□ -1.24
SSR1P43307 RNA5SP177-201ENST00000410122 107 ntBASIC7.31□□□□□ -1.24
SSR1P43307 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.31□□□□□ -1.24
SSR1P43307 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 CDK7P1-201ENST00000434574 693 ntBASIC7.31□□□□□ -1.24
SSR1P43307 LSM3P3-201ENST00000436601 306 ntBASIC7.31□□□□□ -1.24
SSR1P43307 PRKAR1AP1-201ENST00000441422 1162 ntBASIC7.31□□□□□ -1.24
SSR1P43307 DBIL5P2-201ENST00000443827 253 ntBASIC7.31□□□□□ -1.24
SSR1P43307 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AC019080.2-201ENST00000453859 394 ntBASIC7.31□□□□□ -1.24
SSR1P43307 AC010878.1-201ENST00000456500 1047 ntBASIC7.31□□□□□ -1.24
SSR1P43307 AC079944.1-201ENST00000485426 495 ntBASIC7.31□□□□□ -1.24
SSR1P43307 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.31□□□□□ -1.24
SSR1P43307 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC7.31□□□□□ -1.24
SSR1P43307 AP003084.1-201ENST00000524828 742 ntBASIC7.31□□□□□ -1.24
SSR1P43307 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AC016144.1-201ENST00000548175 1087 ntBASIC7.31□□□□□ -1.24
SSR1P43307 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.31□□□□□ -1.24
SSR1P43307 BX005040.2-201ENST00000620504 370 ntBASIC7.31□□□□□ -1.24
SSR1P43307 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AP001153.1-201ENST00000641024 338 ntBASIC7.31□□□□□ -1.24
SSR1P43307 OLMALINC-203ENST00000641087 3779 ntBASIC7.31□□□□□ -1.24
SSR1P43307 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SSR1P43307 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 AC100810.3-201ENST00000633189 2240 ntBASIC7.31□□□□□ -1.24
SSR1P43307 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.31□□□□□ -1.24
SSR1P43307 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.31□□□□□ -1.24
SSR1P43307 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.31□□□□□ -1.24
SSR1P43307 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SSR1P43307 AC011455.2-201ENST00000599320 3336 ntBASIC7.3□□□□□ -1.24
SSR1P43307 CDY19P-201ENST00000411668 1613 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms