Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
COL6A2P12110 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL6A2P12110 MAPK10-270ENST00000641102 3538 ntBASIC7.22□□□□□ -1.25
COL6A2P12110 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL6A2P12110 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
COL6A2P12110 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL6A2P12110 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
COL6A2P12110 AC015871.3-201ENST00000618835 2261 ntBASIC7.21□□□□□ -1.25
COL6A2P12110 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL6A2P12110 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL6A2P12110 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 RNU5E-10P-201ENST00000363506 118 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 CST13P-201ENST00000376992 428 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
COL6A2P12110 AL050305.1-201ENST00000399993 1230 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 AC009413.1-201ENST00000414823 399 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 ETF1P1-206ENST00000427296 984 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 AL390879.1-201ENST00000439143 386 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.21□□□□□ -1.26
COL6A2P12110 AC131233.1-201ENST00000479200 955 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 SUMO2P7-201ENST00000511179 285 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AC010376.1-201ENST00000522101 334 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 AP003066.2-201ENST00000529375 555 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 AC005000.1-201ENST00000536192 288 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 ULK4P1-202ENST00000565174 503 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.21□□□□□ -1.26
COL6A2P12110 MRPL45P2-203ENST00000573318 473 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 MIR3689F-201ENST00000579617 66 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 RN7SL835P-201ENST00000579920 262 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 U6.48-201ENST00000618523 106 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AC006386.1-201ENST00000619436 415 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 PFN1P2-202ENST00000621347 397 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AP003068.4-201ENST00000623192 802 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 AC016582.3-206ENST00000636547 207 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 CR788268.1-201ENST00000603931 1809 ntBASIC7.21□□□□□ -1.26
COL6A2P12110 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
COL6A2P12110 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.21□□□□□ -1.26
COL6A2P12110 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
COL6A2P12110 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
COL6A2P12110 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL6A2P12110 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 AC012321.1-201ENST00000561622 1588 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC7.2□□□□□ -1.26
COL6A2P12110 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 KYNUP1-201ENST00000466683 1406 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.2□□□□□ -1.26
COL6A2P12110 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL6A2P12110 TAS2R15P-201ENST00000390674 928 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 RN7SKP232-201ENST00000410170 290 ntBASIC7.2□□□□□ -1.26
COL6A2P12110 FDPSP1-201ENST00000424976 1071 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms