Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.42□□□□□ -1.22
TPM1P09493 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.42□□□□□ -1.22
TPM1P09493 AC097467.4-201ENST00000605504 141 ntBASIC7.42□□□□□ -1.22
TPM1P09493 AL354718.1-201ENST00000619764 589 ntBASIC7.42□□□□□ -1.22
TPM1P09493 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TPM1P09493 KYNUP2-201ENST00000582280 1329 ntBASIC7.42□□□□□ -1.22
TPM1P09493 Z97989.1-201ENST00000531702 2421 ntBASIC7.42□□□□□ -1.22
TPM1P09493 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.42□□□□□ -1.22
TPM1P09493 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TPM1P09493 AC011504.1-201ENST00000623331 4103 ntBASIC7.42□□□□□ -1.22
TPM1P09493 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TPM1P09493 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
TPM1P09493 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
TPM1P09493 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
TPM1P09493 AC005225.5-201ENST00000623547 2225 ntBASIC7.42□□□□□ -1.22
TPM1P09493 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM1P09493 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
TPM1P09493 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 RNA5SP514-201ENST00000363717 111 ntBASIC7.41□□□□□ -1.22
TPM1P09493 PCNAP3-201ENST00000397222 778 ntBASIC7.41□□□□□ -1.22
TPM1P09493 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM1P09493 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 SETP4-201ENST00000455717 868 ntBASIC7.41□□□□□ -1.22
TPM1P09493 RN7SL187P-201ENST00000495587 303 ntBASIC7.41□□□□□ -1.22
TPM1P09493 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM1P09493 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM1P09493 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TPM1P09493 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.41□□□□□ -1.22
TPM1P09493 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM1P09493 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
TPM1P09493 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 AC004908.1-201ENST00000606572 541 ntBASIC7.41□□□□□ -1.22
TPM1P09493 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.41□□□□□ -1.22
TPM1P09493 RN7SL126P-201ENST00000616400 299 ntBASIC7.41□□□□□ -1.22
TPM1P09493 PART1_3.1-201ENST00000619680 131 ntBASIC7.41□□□□□ -1.22
TPM1P09493 AC021422.1-201ENST00000621212 473 ntBASIC7.41□□□□□ -1.22
TPM1P09493 AC004836.1-201ENST00000623032 634 ntBASIC7.41□□□□□ -1.22
TPM1P09493 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
TPM1P09493 AC020658.2-201ENST00000559030 4020 ntBASIC7.41□□□□□ -1.22
TPM1P09493 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.41□□□□□ -1.22
TPM1P09493 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
TPM1P09493 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
TPM1P09493 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 AP002800.1-201ENST00000624982 2225 ntBASIC7.4□□□□□ -1.22
TPM1P09493 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM1P09493 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 Z95114.1-201ENST00000624264 14574 ntBASIC7.4□□□□□ -1.22
TPM1P09493 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM1P09493 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TPM1P09493 OR7E91P-201ENST00000400027 866 ntBASIC7.4□□□□□ -1.22
TPM1P09493 OR2W4P-201ENST00000406496 926 ntBASIC7.4□□□□□ -1.22
TPM1P09493 CYCSP17-201ENST00000407870 315 ntBASIC7.4□□□□□ -1.22
TPM1P09493 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.4□□□□□ -1.22
TPM1P09493 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM1P09493 AC245884.2-201ENST00000426257 404 ntBASIC7.4□□□□□ -1.22
TPM1P09493 MYL6P3-201ENST00000436904 432 ntBASIC7.4□□□□□ -1.22
TPM1P09493 LDHAP2-201ENST00000437325 985 ntBASIC7.4□□□□□ -1.22
TPM1P09493 RPLP0P1-201ENST00000457002 361 ntBASIC7.4□□□□□ -1.22
TPM1P09493 SULT1D1P-201ENST00000458020 882 ntBASIC7.4□□□□□ -1.22
TPM1P09493 RN7SL228P-201ENST00000470060 303 ntBASIC7.4□□□□□ -1.22
TPM1P09493 RN7SL379P-201ENST00000479912 293 ntBASIC7.4□□□□□ -1.22
TPM1P09493 TAAR3P-202ENST00000481759 1025 ntBASIC7.4□□□□□ -1.22
TPM1P09493 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
TPM1P09493 NACAP6-201ENST00000509572 622 ntBASIC7.4□□□□□ -1.22
TPM1P09493 AC016559.1-201ENST00000511420 199 ntBASIC7.4□□□□□ -1.22
TPM1P09493 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM1P09493 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
TPM1P09493 OR7E161P-201ENST00000533722 967 ntBASIC7.4□□□□□ -1.22
TPM1P09493 OR7E1P-201ENST00000533891 958 ntBASIC7.4□□□□□ -1.22
TPM1P09493 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.4□□□□□ -1.22
TPM1P09493 HIGD1AP9-201ENST00000550710 279 ntBASIC7.4□□□□□ -1.22
TPM1P09493 RN7SL697P-201ENST00000582484 299 ntBASIC7.4□□□□□ -1.22
TPM1P09493 AL138960.1-201ENST00000613838 513 ntBASIC7.4□□□□□ -1.22
TPM1P09493 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM1P09493 AC012254.5-201ENST00000623573 478 ntBASIC7.4□□□□□ -1.22
TPM1P09493 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.4□□□□□ -1.22
TPM1P09493 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC7.4□□□□□ -1.22
TPM1P09493 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
TPM1P09493 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms