Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 FAM27E3-202ENST00000614611 340 ntBASIC5.79□□□□□ -1.48
HLA-DQB1P01920 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.79□□□□□ -1.48
HLA-DQB1P01920 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
HLA-DQB1P01920 OR7E161P-202ENST00000641994 1033 ntBASIC5.79□□□□□ -1.48
HLA-DQB1P01920 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HLA-DQB1P01920 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB1P01920 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB1P01920 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB1P01920 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.79□□□□□ -1.48
HLA-DQB1P01920 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HLA-DQB1P01920 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC022613.3-201ENST00000560740 1346 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 RNA5SP442-201ENST00000365050 107 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 GNG5P2-201ENST00000372054 207 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AL023284.3-201ENST00000407767 334 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 RN7SKP148-201ENST00000410179 275 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 ATP5G1P6-201ENST00000451206 412 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 SCDP1-201ENST00000455244 1081 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CCNJP2-201ENST00000457810 1163 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 RN7SL379P-201ENST00000479912 293 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC025470.1-201ENST00000510053 2032 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC023310.2-201ENST00000553844 547 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 CTSLP2-201ENST00000580501 394 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 MIR3689C-201ENST00000581239 72 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC005070.1-201ENST00000603744 365 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AL035410.2-201ENST00000604963 864 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 RN7SL820P-201ENST00000616437 299 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC243830.3-201ENST00000616810 376 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AP005212.3-201ENST00000619964 528 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 OR5G5P-204ENST00000627642 621 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 AC130456.1-201ENST00000565085 1363 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 MTCO1P25-201ENST00000414449 1799 ntBASIC5.78□□□□□ -1.48
HLA-DQB1P01920 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.78□□□□□ -1.48
HLA-DQB1P01920 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AC007114.2-201ENST00000576014 4281 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 NHP2P2-201ENST00000396362 460 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 TAS2R2P-201ENST00000421146 910 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 CHCHD3P1-201ENST00000425516 676 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AL390879.1-201ENST00000439143 386 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AL161626.1-201ENST00000441480 490 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AC010878.1-201ENST00000456500 1047 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 RPSAP24-201ENST00000461543 873 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 RPS2P25-201ENST00000467247 580 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AC139272.1-201ENST00000505516 640 ntBASIC5.77□□□□□ -1.49
HLA-DQB1P01920 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-DQB1P01920 IGLVV-66-201ENST00000523818 341 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms