Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.41□□□□□ -1.38
SCN2BO60939 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.41□□□□□ -1.38
SCN2BO60939 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.41□□□□□ -1.38
SCN2BO60939 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.41□□□□□ -1.38
SCN2BO60939 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.41□□□□□ -1.38
SCN2BO60939 MIR6829-201ENST00000620375 67 ntBASIC6.41□□□□□ -1.38
SCN2BO60939 AC008626.2-201ENST00000624425 248 ntBASIC6.41□□□□□ -1.38
SCN2BO60939 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.41□□□□□ -1.38
SCN2BO60939 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.41□□□□□ -1.38
SCN2BO60939 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
SCN2BO60939 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.41□□□□□ -1.38
SCN2BO60939 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 AC005618.1-201ENST00000606901 3148 ntBASIC6.41□□□□□ -1.38
SCN2BO60939 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SCN2BO60939 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.4□□□□□ -1.38
SCN2BO60939 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.4□□□□□ -1.38
SCN2BO60939 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.4□□□□□ -1.38
SCN2BO60939 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.4□□□□□ -1.38
SCN2BO60939 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SCN2BO60939 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
SCN2BO60939 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 AL451064.2-201ENST00000623514 1654 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.4□□□□□ -1.38
SCN2BO60939 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
SCN2BO60939 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC6.4□□□□□ -1.38
SCN2BO60939 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
SCN2BO60939 RN7SKP188-201ENST00000410789 317 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.4□□□□□ -1.38
SCN2BO60939 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.4□□□□□ -1.38
SCN2BO60939 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.4□□□□□ -1.38
SCN2BO60939 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.4□□□□□ -1.38
SCN2BO60939 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.4□□□□□ -1.38
SCN2BO60939 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC6.4□□□□□ -1.38
SCN2BO60939 CR391992.1-201ENST00000438601 394 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AL139156.3-201ENST00000454802 394 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.4□□□□□ -1.38
SCN2BO60939 RPL23AP80-201ENST00000495605 424 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.4□□□□□ -1.38
SCN2BO60939 AC106760.2-201ENST00000504159 619 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 ENPP7P3-201ENST00000509123 241 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 RNA5SP278-201ENST00000517055 102 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.4□□□□□ -1.38
SCN2BO60939 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.4□□□□□ -1.38
SCN2BO60939 AP001646.2-201ENST00000528645 1156 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.4□□□□□ -1.38
SCN2BO60939 AL132640.2-202ENST00000559732 614 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.4□□□□□ -1.38
SCN2BO60939 RN7SL697P-201ENST00000582484 299 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.4□□□□□ -1.38
SCN2BO60939 EXOSC3P2-201ENST00000594464 497 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC012629.3-201ENST00000623397 328 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC026108.1-201ENST00000635444 547 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 ZNF969P-201ENST00000510345 2341 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 AC025809.2-201ENST00000625085 1802 ntBASIC6.4□□□□□ -1.38
SCN2BO60939 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SCN2BO60939 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.4□□□□□ -1.39
SCN2BO60939 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
SCN2BO60939 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.4□□□□□ -1.39
SCN2BO60939 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SCN2BO60939 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
SCN2BO60939 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
SCN2BO60939 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SCN2BO60939 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.39□□□□□ -1.39
SCN2BO60939 AC007012.2-201ENST00000623206 1676 ntBASIC6.39□□□□□ -1.39
SCN2BO60939 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SCN2BO60939 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.39□□□□□ -1.39
SCN2BO60939 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SCN2BO60939 AC023886.2-201ENST00000321285 411 ntBASIC6.39□□□□□ -1.39
SCN2BO60939 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SCN2BO60939 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SCN2BO60939 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.39□□□□□ -1.39
SCN2BO60939 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.39□□□□□ -1.39
SCN2BO60939 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms