Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 C5orf67-201ENST00000438651 765 ntAPPRIS P2 TSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC097358.1-201ENST00000438827 582 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC092431.2-201ENST00000441658 318 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 OR51P1P-201ENST00000447547 942 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RNA5SP103-201ENST00000459503 118 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC074051.1-201ENST00000470389 781 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SL869P-201ENST00000497032 300 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SL167P-201ENST00000498381 302 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC107385.1-201ENST00000507985 778 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 IGHVIII-26-1-201ENST00000520387 250 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 IGHVIII-82-201ENST00000522058 250 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 PPP1R1AP1-201ENST00000525622 425 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC018716.1-201ENST00000534604 561 ntTSL 4 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC084824.2-201ENST00000548906 345 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC012181.2-201ENST00000570210 699 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 MED31-203ENST00000575197 593 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SL786P-201ENST00000579130 298 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 MIR4519-201ENST00000579767 58 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC061975.3-201ENST00000583209 244 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC007795.1-201ENST00000585883 437 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 HMGN2P46-208ENST00000598619 490 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC024451.4-201ENST00000602578 752 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC009686.2-201ENST00000607017 577 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC139792.1-201ENST00000607051 647 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC015712.7-201ENST00000615211 635 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AC009152.1-201ENST00000618290 556 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 MIR6744-201ENST00000619480 66 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 DPCD-206ENST00000626968 541 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 PKP4-218ENST00000629219 162 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 OR55B1P-203ENST00000641518 2602 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 NEAT1-202ENST00000501122 22743 ntBASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LINC01558Q9Y6Z2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 LIPM-201ENST00000404743 1439 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL731566.1-201ENST00000620490 1937 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC104623.2-202ENST00000623477 4002 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 CCNT2P1-201ENST00000423082 1315 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 NEK2P2-201ENST00000438441 1338 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RNA5SP161-201ENST00000363871 115 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RNU1-146P-201ENST00000364015 165 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RNA5SP149-201ENST00000364952 92 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP292-201ENST00000365522 317 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 SNORA2C-201ENST00000408564 137 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 MTND2P12-201ENST00000417560 1252 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL353705.3-201ENST00000418694 1250 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 OR51A8P-201ENST00000421277 940 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC108479.1-201ENST00000431142 427 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC073475.1-201ENST00000434012 592 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AL441963.1-201ENST00000435137 792 ntBASIC3.29□□□□□ -1.88
LINC01558Q9Y6Z2 AC011193.1-202ENST00000441287 323 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms