Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 NFKB1-212ENST00000600343 4010 ntTSL 2 BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CHD8Q9HCK8 AC109780.1-201ENST00000451768 1344 ntBASIC6.27□□□□□ -1.4
CHD8Q9HCK8 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC6.27□□□□□ -1.4
CHD8Q9HCK8 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CHD8Q9HCK8 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CHD8Q9HCK8 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 U3.43-201ENST00000410734 213 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AL772161.1-201ENST00000439130 476 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AL445665.1-202ENST00000452436 324 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 RPL26P30-201ENST00000453533 435 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 PSMA6P2-201ENST00000457574 686 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 RNA5SP340-201ENST00000517132 107 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC007255.2-201ENST00000604053 631 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 FO082842.1-201ENST00000423552 1370 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC018992.1-201ENST00000523778 2149 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 MRPS6P2-201ENST00000381143 370 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AL139806.1-201ENST00000403057 1002 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AL663061.1-201ENST00000416625 580 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 RPL5P6-201ENST00000425640 886 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC026336.1-201ENST00000466577 351 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 GM2AP2-201ENST00000491764 562 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 GSTP1P1-201ENST00000548078 319 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC018558.5-201ENST00000565840 952 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AP005136.2-201ENST00000583253 1049 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC104184.1-201ENST00000607513 721 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 Mico1.1-201ENST00000611698 204 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CHD8Q9HCK8 AC005614.1-201ENST00000598952 3653 ntBASIC6.27□□□□□ -1.41
CHD8Q9HCK8 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 AC026951.1-201ENST00000559530 2459 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 AC016397.1-201ENST00000412463 242 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 RPL12P3-201ENST00000440080 396 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 EEF1B2P6-201ENST00000445713 673 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 HIGD1AP8-201ENST00000453927 274 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 RPSAP50-201ENST00000481955 852 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 AC066616.1-201ENST00000486795 413 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 SCARNA5-201ENST00000516201 276 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 AL049539.1-201ENST00000611964 459 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 AL121949.2-201ENST00000403446 1548 ntBASIC6.26□□□□□ -1.41
CHD8Q9HCK8 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 ZMYND8-218ENST00000540497 3405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
CHD8Q9HCK8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms