Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 RNA5SP302-201ENST00000364896 100 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 RPS16P9-201ENST00000477220 427 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 RPL7L1P7-201ENST00000509986 724 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 IGLC4-201ENST00000517690 248 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AL121579.2-201ENST00000555466 590 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AL445647.2-201ENST00000615170 130 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AL731556.1-201ENST00000394628 3711 ntBASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RSPO3Q9BXY4 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 OLMALINC-203ENST00000641087 3779 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 RNU1-55P-201ENST00000365510 158 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 MICG-208ENST00000416822 132 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 RPL18AP14-201ENST00000417685 526 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 CT45A11P-201ENST00000448043 1134 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC236972.4-201ENST00000458091 963 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 NPM1P27-201ENST00000502784 830 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 OR52H2P-201ENST00000514607 902 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 KCTD9P4-201ENST00000526766 1166 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 OR52K3P-201ENST00000531655 943 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC091304.4-201ENST00000565703 620 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 RN7SL689P-201ENST00000577215 297 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 RN7SL426P-201ENST00000579106 295 ntBASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RSPO3Q9BXY4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms