Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX3Q99909 DDX10P2-201ENST00000417796 2614 ntBASIC5.93□□□□□ -1.46
SSX3Q99909 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX3Q99909 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX3Q99909 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX3Q99909 RNA5SP218-201ENST00000363188 109 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 RNA5SP355-201ENST00000365317 135 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 AL773545.3-201ENST00000414297 706 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 OR7E117P-201ENST00000422682 1112 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 CYP4F34P-201ENST00000425951 481 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 AC114755.4-201ENST00000439114 443 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX3Q99909 MTND6P5-201ENST00000448266 512 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX3Q99909 RPS4XP19-201ENST00000460237 736 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 RN7SL751P-201ENST00000473281 284 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 RPS14P7-201ENST00000473701 448 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 CR383656.1-201ENST00000484916 377 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX3Q99909 SUMO2P4-201ENST00000504193 276 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 AC108120.1-201ENST00000506543 991 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 CASP1P2-201ENST00000526830 1258 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.92□□□□□ -1.46
SSX3Q99909 MYL6-211ENST00000548580 528 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 NF1P12-201ENST00000549593 583 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX3Q99909 AP001542.1-201ENST00000591314 200 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX3Q99909 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX3Q99909 AC005070.2-201ENST00000604391 260 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 AL683813.2-201ENST00000605245 502 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 AL354950.1-201ENST00000614150 568 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX3Q99909 AL121985.3-201ENST00000620690 523 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 AL596275.2-203ENST00000641951 371 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 AC123769.1-201ENST00000530992 3192 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 EEF1A1P5-201ENST00000436459 1389 ntBASIC5.92□□□□□ -1.46
SSX3Q99909 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX3Q99909 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX3Q99909 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX3Q99909 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX3Q99909 U3.14-201ENST00000365363 227 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 EIF4A1P13-201ENST00000415667 230 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 RPL23AP18-201ENST00000416139 468 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AL161742.1-201ENST00000418154 584 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AC127537.1-201ENST00000418183 748 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX3Q99909 FDPSP1-201ENST00000424976 1071 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 AC092646.1-201ENST00000427142 901 ntBASIC5.91□□□□□ -1.46
SSX3Q99909 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX3Q99909 PMS2P11-201ENST00000451831 574 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms