Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.76□□□□□ -1.33
VMP1Q96GC9 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VMP1Q96GC9 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VMP1Q96GC9 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 RPS3AP5-201ENST00000389400 821 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 NPM1P31-201ENST00000399021 764 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 CNN3P1-201ENST00000401596 935 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 RNA5SP231-201ENST00000410496 138 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 DPPA2P2-201ENST00000418220 897 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 RN7SL392P-201ENST00000473024 299 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC105420.1-201ENST00000504389 582 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 IGKV1D-32-201ENST00000517449 318 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 NF1P12-201ENST00000549593 583 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC090774.2-201ENST00000584708 322 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC015801.1-201ENST00000585651 153 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 OR7A11P-201ENST00000597719 953 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AL353807.4-201ENST00000604995 257 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 RNU6-84P-201ENST00000607737 102 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC012510.1-201ENST00000607946 759 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AP005329.3-201ENST00000609924 686 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC103564.3-201ENST00000621194 220 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC010168.2-201ENST00000562691 5428 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC062029.1-202ENST00000606164 3651 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VMP1Q96GC9 MFSD8-256ENST00000641949 1640 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AL035563.1-201ENST00000609087 1539 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VMP1Q96GC9 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.75□□□□□ -1.33
VMP1Q96GC9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
VMP1Q96GC9 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
VMP1Q96GC9 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.75□□□□□ -1.33
VMP1Q96GC9 AC020633.1-201ENST00000468439 2247 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VMP1Q96GC9 AC105749.1-201ENST00000631338 2008 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VMP1Q96GC9 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
VMP1Q96GC9 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
VMP1Q96GC9 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 RNU4-81P-201ENST00000363561 144 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 AL117344.1-201ENST00000407196 616 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 ANXA2P2-201ENST00000435128 1020 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
VMP1Q96GC9 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 RN7SL775P-201ENST00000498361 336 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 AC008967.1-201ENST00000504843 163 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 AC022616.2-201ENST00000523185 300 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 AP003084.1-201ENST00000524828 742 ntBASIC6.74□□□□□ -1.33
VMP1Q96GC9 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
VMP1Q96GC9 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms