Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 RNU6-673P-201ENST00000365084 104 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 SNORA35-201ENST00000386104 128 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 SLC25A5P7-201ENST00000406156 896 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AL050402.1-201ENST00000440477 770 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 CYCSP44-201ENST00000448560 313 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC023794.3-204ENST00000510754 236 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 SUMO2P19-201ENST00000518920 295 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 IGLVV-66-201ENST00000523818 341 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC007537.1-201ENST00000539347 327 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 COX6CP11-201ENST00000555293 229 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC026458.1-201ENST00000564330 438 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 MIR4266-201ENST00000583300 55 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 RN7SL778P-201ENST00000607160 297 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC138904.2-201ENST00000614412 107 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 TCL6_3.1-201ENST00000619064 137 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC119674.1-213ENST00000641177 1386 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 Z97989.1-201ENST00000531702 2421 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 AC034229.2-201ENST00000566945 2508 ntBASIC5.64□□□□□ -1.51
CCDC71LQ8N9Z2 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AC006511.3-201ENST00000624929 1783 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 RN7SKP118-201ENST00000364331 330 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 RNA5SP396-201ENST00000364834 120 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AL663061.1-201ENST00000416625 580 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 GAPDHP75-201ENST00000433910 943 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 SUMO2P8-201ENST00000434672 286 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 MGAT2P1-201ENST00000449718 797 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 TCEAL4P1-201ENST00000453620 588 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 SULT1D1P-201ENST00000458020 882 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 WBP1LP1-201ENST00000460451 896 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 RN7SKP248-201ENST00000516278 305 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AP006587.2-201ENST00000530696 493 ntBASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC71LQ8N9Z2 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms