Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 OR7E25P-201ENST00000344844 931 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 SUGT1P2-201ENST00000379452 992 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AL049697.3-201ENST00000406493 982 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 OR3D1P-201ENST00000438288 955 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 RPL23AP68-201ENST00000480924 445 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AC095052.1-201ENST00000509955 863 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AC122713.1-201ENST00000518368 1015 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 MRPS21P8-201ENST00000569196 235 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AC008521.2-201ENST00000591021 259 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 AL512652.1-201ENST00000619006 500 ntBASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC9.88□□□□□ -0.83
CDC42BPAQ5VT25 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RNA5SP435-201ENST00000364044 108 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AL512422.1-201ENST00000407033 553 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC110602.1-201ENST00000437414 318 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RBMY2AP-201ENST00000445405 1157 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RBMY2CP-201ENST00000448575 1157 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RBMY2DP-202ENST00000448881 1157 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RBMY2BP-202ENST00000451071 1156 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC139272.1-201ENST00000505516 640 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC131392.1-201ENST00000506490 633 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC027369.2-201ENST00000528030 440 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AL953862.2-201ENST00000603089 820 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 MIR6085-201ENST00000618314 110 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC073065.1-201ENST00000411678 2866 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 COX6B1P3-201ENST00000312310 260 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RN7SKP78-201ENST00000364711 318 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 RN7SL104P-201ENST00000498686 293 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AC011455.2-201ENST00000599320 3336 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 OR8B9P-202ENST00000642028 5216 ntBASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
CDC42BPAQ5VT25 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AC062029.1-202ENST00000606164 3651 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AC091305.2-201ENST00000624049 1576 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 RPL23AP19-201ENST00000436229 369 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 PPIAP7-201ENST00000454070 489 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 RBBP4P1-201ENST00000502424 1276 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AC006499.4-201ENST00000510947 694 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AP000620.1-201ENST00000527147 504 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 NPIPB1P-202ENST00000588786 828 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AC073333.2-201ENST00000603589 769 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 AL353743.3-201ENST00000442109 1468 ntBASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
CDC42BPAQ5VT25 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms