Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 AC026951.2-201ENST00000613847 241 ntBASIC7.05□□□□□ -1.28
HTTP42858 AC131009.3-201ENST00000621809 287 ntBASIC7.05□□□□□ -1.28
HTTP42858 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
HTTP42858 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.05□□□□□ -1.28
HTTP42858 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.05□□□□□ -1.28
HTTP42858 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.05□□□□□ -1.28
HTTP42858 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HTTP42858 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 U3.7-201ENST00000363668 216 ntBASIC7.05□□□□□ -1.28
HTTP42858 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.05□□□□□ -1.28
HTTP42858 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.05□□□□□ -1.28
HTTP42858 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.05□□□□□ -1.28
HTTP42858 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.05□□□□□ -1.28
HTTP42858 AC015802.2-201ENST00000589690 189 ntBASIC7.05□□□□□ -1.28
HTTP42858 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HTTP42858 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HTTP42858 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 OTOF-205ENST00000403946 6937 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
HTTP42858 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
HTTP42858 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HTTP42858 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.04□□□□□ -1.28
HTTP42858 AC098847.1-201ENST00000473094 348 ntBASIC7.04□□□□□ -1.28
HTTP42858 AL136131.3-201ENST00000607600 188 ntBASIC7.04□□□□□ -1.28
HTTP42858 AC073488.2-201ENST00000631903 751 ntBASIC7.04□□□□□ -1.28
HTTP42858 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.04□□□□□ -1.28
HTTP42858 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
HTTP42858 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 RNA5SP394-201ENST00000364216 119 ntBASIC7.04□□□□□ -1.28
HTTP42858 AL109941.1-201ENST00000401925 229 ntBASIC7.04□□□□□ -1.28
HTTP42858 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.04□□□□□ -1.28
HTTP42858 AL035660.1-201ENST00000422041 222 ntBASIC7.04□□□□□ -1.28
HTTP42858 EIF2S2P3-201ENST00000428356 999 ntBASIC7.04□□□□□ -1.28
HTTP42858 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.04□□□□□ -1.28
HTTP42858 AC013399.1-201ENST00000450311 418 ntBASIC7.04□□□□□ -1.28
HTTP42858 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 AC006530.1-201ENST00000555980 571 ntBASIC7.04□□□□□ -1.28
HTTP42858 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.04□□□□□ -1.28
HTTP42858 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.04□□□□□ -1.28
HTTP42858 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.04□□□□□ -1.28
HTTP42858 AL139407.1-201ENST00000613826 1175 ntBASIC7.04□□□□□ -1.28
HTTP42858 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.04□□□□□ -1.28
HTTP42858 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 ZNF154-202ENST00000512439 5687 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HTTP42858 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.03□□□□□ -1.28
HTTP42858 AL132875.1-201ENST00000403623 949 ntBASIC7.03□□□□□ -1.28
HTTP42858 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.03□□□□□ -1.28
HTTP42858 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.03□□□□□ -1.28
HTTP42858 AL034399.1-201ENST00000451535 380 ntBASIC7.03□□□□□ -1.28
HTTP42858 RN7SL326P-201ENST00000477493 296 ntBASIC7.03□□□□□ -1.28
HTTP42858 RN7SL714P-201ENST00000487050 298 ntBASIC7.03□□□□□ -1.28
HTTP42858 OR4A13P-201ENST00000529316 942 ntBASIC7.03□□□□□ -1.28
HTTP42858 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.03□□□□□ -1.28
HTTP42858 MIR193BHG-214ENST00000641765 509 ntBASIC7.03□□□□□ -1.28
HTTP42858 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC7.03□□□□□ -1.28
HTTP42858 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 MAPKBP1-202ENST00000457542 7232 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 AC005839.1-201ENST00000624148 3213 ntBASIC7.03□□□□□ -1.28
HTTP42858 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HTTP42858 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HTTP42858 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HTTP42858 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HTTP42858 RNU1-134P-201ENST00000362935 165 ntBASIC7.03□□□□□ -1.28
HTTP42858 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.03□□□□□ -1.28
HTTP42858 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.03□□□□□ -1.28
HTTP42858 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.03□□□□□ -1.28
HTTP42858 AC010998.3-201ENST00000613871 631 ntBASIC7.03□□□□□ -1.28
HTTP42858 AC068870.2-201ENST00000620635 389 ntBASIC7.03□□□□□ -1.28
HTTP42858 XRCC6P4-201ENST00000518193 2067 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms