Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 CDY5P-201ENST00000411487 1580 ntBASIC6.23□□□□□ -1.41
SHC1P29353 CDY9P-201ENST00000451397 1580 ntBASIC6.23□□□□□ -1.41
SHC1P29353 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SHC1P29353 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHC1P29353 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SHC1P29353 ZNF37CP-201ENST00000406795 241 ntBASIC6.23□□□□□ -1.41
SHC1P29353 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.23□□□□□ -1.41
SHC1P29353 MTND6P1-201ENST00000417434 424 ntBASIC6.23□□□□□ -1.41
SHC1P29353 RPL18AP14-201ENST00000417685 526 ntBASIC6.23□□□□□ -1.41
SHC1P29353 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.23□□□□□ -1.41
SHC1P29353 AL354872.1-201ENST00000456361 967 ntBASIC6.23□□□□□ -1.41
SHC1P29353 AL096803.1-201ENST00000456921 1021 ntBASIC6.23□□□□□ -1.41
SHC1P29353 TREML3P-201ENST00000457327 501 ntBASIC6.23□□□□□ -1.41
SHC1P29353 RN7SL849P-201ENST00000485236 295 ntBASIC6.23□□□□□ -1.41
SHC1P29353 AC122714.1-201ENST00000502510 459 ntBASIC6.23□□□□□ -1.41
SHC1P29353 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 AC017007.1-201ENST00000511960 415 ntBASIC6.23□□□□□ -1.41
SHC1P29353 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.23□□□□□ -1.41
SHC1P29353 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 PPIAP6-201ENST00000557078 499 ntBASIC6.23□□□□□ -1.41
SHC1P29353 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.23□□□□□ -1.41
SHC1P29353 AC100832.2-201ENST00000582080 776 ntBASIC6.23□□□□□ -1.41
SHC1P29353 AC073857.1-201ENST00000625082 1054 ntBASIC6.23□□□□□ -1.41
SHC1P29353 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.23□□□□□ -1.41
SHC1P29353 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
SHC1P29353 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.23□□□□□ -1.41
SHC1P29353 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC6.23□□□□□ -1.41
SHC1P29353 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.23□□□□□ -1.41
SHC1P29353 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHC1P29353 AL512329.1-201ENST00000404600 1592 ntBASIC6.23□□□□□ -1.41
SHC1P29353 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
SHC1P29353 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.22□□□□□ -1.41
SHC1P29353 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.22□□□□□ -1.41
SHC1P29353 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 RNA5SP512-201ENST00000364550 120 ntBASIC6.22□□□□□ -1.41
SHC1P29353 AC068138.1-201ENST00000412635 217 ntBASIC6.22□□□□□ -1.41
SHC1P29353 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.22□□□□□ -1.41
SHC1P29353 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.22□□□□□ -1.41
SHC1P29353 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 AC114940.1-201ENST00000512162 1265 ntBASIC6.22□□□□□ -1.41
SHC1P29353 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.22□□□□□ -1.41
SHC1P29353 MTCYBP44-201ENST00000514835 823 ntBASIC6.22□□□□□ -1.41
SHC1P29353 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 OR9L1P-201ENST00000529493 933 ntBASIC6.22□□□□□ -1.41
SHC1P29353 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.22□□□□□ -1.41
SHC1P29353 GTF2IP6-201ENST00000583143 541 ntBASIC6.22□□□□□ -1.41
SHC1P29353 OR7E19P-202ENST00000589942 844 ntBASIC6.22□□□□□ -1.41
SHC1P29353 RPS27AP19-201ENST00000597285 458 ntBASIC6.22□□□□□ -1.41
SHC1P29353 AC111186.1-201ENST00000604684 130 ntBASIC6.22□□□□□ -1.41
SHC1P29353 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.22□□□□□ -1.41
SHC1P29353 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.22□□□□□ -1.41
SHC1P29353 AC073862.4-201ENST00000622982 854 ntBASIC6.22□□□□□ -1.41
SHC1P29353 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.22□□□□□ -1.41
SHC1P29353 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHC1P29353 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.22□□□□□ -1.41
SHC1P29353 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms