Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.63□□□□□ -1.03
ERCC3P19447 FCGR1CP-201ENST00000579737 1127 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 RN7SL835P-201ENST00000579920 262 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC079880.2-201ENST00000603790 1213 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 OR7A19P-201ENST00000608051 733 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC009159.2-201ENST00000617603 606 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 uc_338.37-201ENST00000620113 186 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.63□□□□□ -1.03
ERCC3P19447 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 METTL8-218ENST00000638989 876 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 METTL8-219ENST00000640734 726 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC068733.2-201ENST00000605434 1418 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
ERCC3P19447 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.62□□□□□ -1.03
ERCC3P19447 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
ERCC3P19447 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 RPL23AP18-201ENST00000416139 468 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 AC241520.1-201ENST00000422654 1099 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 PTP4A1P7-201ENST00000423476 514 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC8.62□□□□□ -1.03
ERCC3P19447 AC009362.1-201ENST00000427253 406 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 MTCO1P51-201ENST00000427672 1060 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 SALL1P1-201ENST00000438101 3837 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 AC009237.1-201ENST00000442127 744 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 MTND6P5-201ENST00000448266 512 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC8.62□□□□□ -1.03
ERCC3P19447 HMGB1P26-201ENST00000452520 628 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 RPLP0P1-201ENST00000457002 361 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC8.62□□□□□ -1.03
ERCC3P19447 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 AC023825.1-201ENST00000566704 1030 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 DHFRP1-201ENST00000579682 559 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.62□□□□□ -1.03
ERCC3P19447 AF230666.2-201ENST00000602328 725 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 AC005034.4-201ENST00000603612 899 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 AC069499.2-201ENST00000610665 382 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 MIR6070-201ENST00000613967 103 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 AC063952.4-201ENST00000634744 825 ntTSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 AC006453.3-201ENST00000635891 377 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
ERCC3P19447 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ERCC3P19447 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 YES1-203ENST00000577961 4554 ntTSL 5 BASIC8.62□□□□□ -1.03
ERCC3P19447 LRRC37A9P-201ENST00000603850 5376 ntBASIC8.62□□□□□ -1.03
ERCC3P19447 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 AC011592.1-201ENST00000624647 3634 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC8.61□□□□□ -1.03
ERCC3P19447 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
ERCC3P19447 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
ERCC3P19447 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.61□□□□□ -1.03
ERCC3P19447 AC012360.3-201ENST00000610036 3449 ntBASIC8.61□□□□□ -1.03
ERCC3P19447 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ERCC3P19447 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms