Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RBMY2CP-201ENST00000448575 1157 ntBASIC7.32□□□□□ -1.24
RB1P06400 RBMY2DP-202ENST00000448881 1157 ntBASIC7.32□□□□□ -1.24
RB1P06400 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.32□□□□□ -1.24
RB1P06400 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 BLNK-209ENST00000495266 440 ntTSL 5 BASIC7.32□□□□□ -1.24
RB1P06400 AC111000.5-201ENST00000506559 1178 ntBASIC7.32□□□□□ -1.24
RB1P06400 AC146944.3-201ENST00000509969 371 ntBASIC7.32□□□□□ -1.24
RB1P06400 HSD3BP3-201ENST00000514706 994 ntBASIC7.32□□□□□ -1.24
RB1P06400 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.32□□□□□ -1.24
RB1P06400 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.32□□□□□ -1.24
RB1P06400 SNRPCP6-201ENST00000528310 210 ntBASIC7.32□□□□□ -1.24
RB1P06400 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.32□□□□□ -1.24
RB1P06400 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.32□□□□□ -1.24
RB1P06400 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.32□□□□□ -1.24
RB1P06400 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.32□□□□□ -1.24
RB1P06400 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.32□□□□□ -1.24
RB1P06400 AC020914.7-201ENST00000594477 545 ntBASIC7.32□□□□□ -1.24
RB1P06400 AC009955.2-201ENST00000597288 542 ntBASIC7.32□□□□□ -1.24
RB1P06400 AC091133.5-201ENST00000603088 301 ntBASIC7.32□□□□□ -1.24
RB1P06400 CR382285.1-202ENST00000604687 547 ntBASIC7.32□□□□□ -1.24
RB1P06400 AC114477.1-201ENST00000605097 605 ntBASIC7.32□□□□□ -1.24
RB1P06400 AC004908.1-201ENST00000606572 541 ntBASIC7.32□□□□□ -1.24
RB1P06400 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.32□□□□□ -1.24
RB1P06400 uc_338.31-201ENST00000615595 186 ntBASIC7.32□□□□□ -1.24
RB1P06400 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.32□□□□□ -1.24
RB1P06400 SNX18P10-201ENST00000625014 519 ntBASIC7.32□□□□□ -1.24
RB1P06400 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.32□□□□□ -1.24
RB1P06400 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.32□□□□□ -1.24
RB1P06400 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RB1P06400 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
RB1P06400 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
RB1P06400 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 COL6A4P1-202ENST00000487147 4317 ntBASIC7.31□□□□□ -1.24
RB1P06400 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 RNA5SP321-201ENST00000362722 111 ntBASIC7.31□□□□□ -1.24
RB1P06400 RNA5SP435-201ENST00000364044 108 ntBASIC7.31□□□□□ -1.24
RB1P06400 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 IFIT1P1-201ENST00000400497 1449 ntBASIC7.31□□□□□ -1.24
RB1P06400 RNA5SP431-201ENST00000410312 120 ntBASIC7.31□□□□□ -1.24
RB1P06400 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.31□□□□□ -1.24
RB1P06400 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 UBBP5-201ENST00000446970 266 ntBASIC7.31□□□□□ -1.24
RB1P06400 RN7SL160P-201ENST00000468558 284 ntBASIC7.31□□□□□ -1.24
RB1P06400 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.31□□□□□ -1.24
RB1P06400 OR52K3P-201ENST00000531655 943 ntBASIC7.31□□□□□ -1.24
RB1P06400 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.31□□□□□ -1.24
RB1P06400 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.31□□□□□ -1.24
RB1P06400 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.31□□□□□ -1.24
RB1P06400 AC005726.4-201ENST00000582858 458 ntBASIC7.31□□□□□ -1.24
RB1P06400 AC015982.1-201ENST00000608113 465 ntBASIC7.31□□□□□ -1.24
RB1P06400 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC7.31□□□□□ -1.24
RB1P06400 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC7.31□□□□□ -1.24
RB1P06400 AC010809.3-201ENST00000621310 641 ntBASIC7.31□□□□□ -1.24
RB1P06400 AC022400.9-201ENST00000623633 273 ntBASIC7.31□□□□□ -1.24
RB1P06400 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.31□□□□□ -1.24
RB1P06400 AP002833.3-201ENST00000625075 2265 ntBASIC7.31□□□□□ -1.24
RB1P06400 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.31□□□□□ -1.24
RB1P06400 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 AC011008.2-201ENST00000624866 3352 ntBASIC7.31□□□□□ -1.24
RB1P06400 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
RB1P06400 AC020978.6-201ENST00000571197 3177 ntBASIC7.3□□□□□ -1.24
RB1P06400 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.3□□□□□ -1.24
RB1P06400 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.3□□□□□ -1.24
RB1P06400 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 TRIM51HP-202ENST00000530412 1823 ntBASIC7.3□□□□□ -1.24
RB1P06400 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 RNA5SP433-201ENST00000364491 114 ntBASIC7.3□□□□□ -1.24
RB1P06400 RNA5SP485-201ENST00000365053 119 ntBASIC7.3□□□□□ -1.24
RB1P06400 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
RB1P06400 RPL12P23-201ENST00000405880 490 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms