Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-AP01891 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-AP01891 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-AP01891 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-AP01891 PWRN1-212ENST00000569908 1435 ntBASIC5.71□□□□□ -1.5
HLA-AP01891 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
HLA-AP01891 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-AP01891 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-AP01891 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
HLA-AP01891 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 AC005225.5-201ENST00000623547 2225 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-AP01891 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 RNA5SP188-201ENST00000362916 129 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 RN7SKP47-201ENST00000365347 328 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 PPIL1P1-201ENST00000423936 499 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 NPM1P30-201ENST00000425092 828 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 H3F3BP1-201ENST00000440551 403 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 ARMC8P1-201ENST00000443069 1289 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 AL591379.2-201ENST00000450223 397 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 SULT1D1P-201ENST00000458020 882 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-AP01891 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-AP01891 AC008040.4-201ENST00000494834 768 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 RN7SL516P-201ENST00000496127 297 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-AP01891 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 AP001804.1-201ENST00000526868 919 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 RPS7P1-201ENST00000571702 585 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 AF186192.2-204ENST00000581667 524 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 EIF1-207ENST00000591776 797 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-AP01891 AC018690.1-201ENST00000608144 626 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 HOTTIP_2.1-201ENST00000616633 376 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 AC106795.5-201ENST00000623288 454 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 AC012254.5-201ENST00000623573 478 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-AP01891 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-AP01891 TTC41P-205ENST00000551270 3963 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 KYNUP2-201ENST00000582280 1329 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
HLA-AP01891 AC139426.3-201ENST00000605648 2059 ntBASIC5.7□□□□□ -1.5
HLA-AP01891 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HLA-AP01891 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
HLA-AP01891 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-AP01891 HSPD1P8-201ENST00000400121 1658 ntBASIC5.69□□□□□ -1.5
HLA-AP01891 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
HLA-AP01891 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
HLA-AP01891 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-AP01891 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
HLA-AP01891 AL136298.2-201ENST00000556497 1570 ntBASIC5.69□□□□□ -1.5
HLA-AP01891 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-AP01891 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-AP01891 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-AP01891 RNA5SP260-201ENST00000363849 111 ntBASIC5.69□□□□□ -1.5
HLA-AP01891 RN7SKP118-201ENST00000364331 330 ntBASIC5.69□□□□□ -1.5
HLA-AP01891 RPL12P1-201ENST00000374520 498 ntBASIC5.69□□□□□ -1.5
HLA-AP01891 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-AP01891 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-AP01891 FTH1P26-201ENST00000406512 701 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms