Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 VN1R12P-201ENST00000403778 876 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 RPL5P20-201ENST00000403848 896 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 FAT1P1-201ENST00000406588 507 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 Z68694.1-201ENST00000413929 841 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AL139413.1-201ENST00000421309 217 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 RPL23AP85-201ENST00000421838 433 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AL606490.7-201ENST00000433136 191 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 COX7BP2-201ENST00000437976 242 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 Z99127.2-201ENST00000441426 334 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 COX6CP2-201ENST00000444980 225 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 Z95152.1-201ENST00000453556 656 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC079203.1-201ENST00000487972 404 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC117383.2-201ENST00000514722 322 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AP001804.1-201ENST00000526868 919 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 OR4A21P-201ENST00000532759 944 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 NQO1-205ENST00000561500 891 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 FRG2HP-201ENST00000568807 832 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 EIF4A3P1-201ENST00000578499 647 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC011193.2-201ENST00000582638 367 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AL360085.1-201ENST00000604713 532 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 CASC15-203ENST00000605917 4461 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 AC020895.2-201ENST00000624996 1839 ntBASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
CNTNAP3Q9BZ76 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 NEK2P2-201ENST00000438441 1338 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 H3F3AP6-201ENST00000230495 411 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 H3F3AP4-201ENST00000369387 411 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 RPL23AP59-201ENST00000399415 461 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC009310.1-201ENST00000414414 451 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 ZDHHC20P2-201ENST00000424108 429 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC126124.1-201ENST00000426104 185 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC242426.1-201ENST00000435270 960 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AL606662.1-201ENST00000445763 553 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 NFU1P2-201ENST00000448700 469 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC016724.1-201ENST00000453215 421 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AL109741.2-201ENST00000455561 343 ntBASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC8.07□□□□□ -1.12
CNTNAP3Q9BZ76 AC008410.1-201ENST00000483777 339 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms