Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC009237.9-201ENST00000414800 347 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 RPL23AP18-201ENST00000416139 468 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC002127.1-201ENST00000421305 225 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 GAPDHP55-201ENST00000423136 803 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 OR5P4P-201ENST00000424698 917 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 ZFAND6P1-201ENST00000434138 605 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 CDC42P2-201ENST00000448566 569 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 TCEAL4P1-201ENST00000453620 588 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 OR7E62P-201ENST00000456741 477 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 RN7SL251P-201ENST00000464175 297 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 RN7SL58P-201ENST00000473445 294 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC128716.1-201ENST00000475129 166 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC111000.1-201ENST00000514545 713 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 IGLV1-62-201ENST00000518003 441 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC100854.1-201ENST00000520351 341 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 MTND1P6-201ENST00000523621 946 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AP003080.1-202ENST00000526526 915 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 OR4A1P-201ENST00000532342 920 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AL390058.1-201ENST00000603834 629 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC015802.5-201ENST00000607478 399 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC034229.4-201ENST00000607861 441 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC110792.4-201ENST00000609843 298 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC098590.2-201ENST00000614787 281 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC243830.2-201ENST00000618067 630 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC023510.2-201ENST00000622162 746 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 SOCS5P5-201ENST00000402732 1586 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.51□□□□□ -1.37
SNX18Q96RF0 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SNX18Q96RF0 AC062029.1-202ENST00000606164 3651 ntBASIC6.51□□□□□ -1.37
SNX18Q96RF0 AL606490.2-201ENST00000457562 1330 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SNX18Q96RF0 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC022034.1-201ENST00000512867 2156 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 CDY5P-201ENST00000411487 1580 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 CDY9P-201ENST00000451397 1580 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 RN7SKP211-201ENST00000363328 315 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC113608.1-201ENST00000398740 305 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 CR848007.2-201ENST00000424918 787 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 AL590623.1-201ENST00000427864 105 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 ARMC8P1-201ENST00000443069 1289 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.5□□□□□ -1.37
SNX18Q96RF0 MTND6P32-201ENST00000457611 483 ntBASIC6.5□□□□□ -1.37
SNX18Q96RF0 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms