Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC022080.2-201ENST00000452932 533 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC026254.2-201ENST00000475295 371 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC009567.2-201ENST00000502989 349 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 SUMO2P7-201ENST00000511179 285 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 RN7SKP64-201ENST00000517206 328 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC007068.2-201ENST00000543168 395 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 MRPS21P9-201ENST00000571150 257 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC120057.5-201ENST00000623840 154 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC061999.1-201ENST00000624454 177 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 AC127024.8-201ENST00000623719 2094 ntBASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
C9orf40Q8IXQ3 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC092821.3-202ENST00000641304 2767 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 PRNCR1-201ENST00000635449 12727 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 RN7SKP205-201ENST00000410999 307 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AP003385.1-201ENST00000426387 893 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC239367.3-201ENST00000428996 814 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 GAPDHP20-201ENST00000444107 1007 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 RPL31P11-202ENST00000454082 372 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 RPL5P33-201ENST00000487833 905 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC106800.2-201ENST00000514009 1103 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC122713.1-201ENST00000518368 1015 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 SCARNA9-201ENST00000530422 353 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 CHEK2P2-201ENST00000554701 672 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 NIFKP4-201ENST00000567275 1192 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC005899.6-201ENST00000620729 297 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 AC079949.2-201ENST00000617117 2933 ntBASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
C9orf40Q8IXQ3 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms