Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 AL359396.1-201ENST00000623151 2376 ntBASIC5.58□□□□□ -1.52
LMO4P61968 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 PPIAP24-201ENST00000328558 471 ntBASIC5.58□□□□□ -1.52
LMO4P61968 AL359694.1-201ENST00000403247 604 ntBASIC5.58□□□□□ -1.52
LMO4P61968 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.58□□□□□ -1.52
LMO4P61968 AL663061.1-201ENST00000416625 580 ntBASIC5.58□□□□□ -1.52
LMO4P61968 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.58□□□□□ -1.52
LMO4P61968 AC245047.1-201ENST00000433276 873 ntBASIC5.58□□□□□ -1.52
LMO4P61968 AC092106.2-201ENST00000436597 487 ntBASIC5.58□□□□□ -1.52
LMO4P61968 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.58□□□□□ -1.52
LMO4P61968 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.58□□□□□ -1.52
LMO4P61968 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.58□□□□□ -1.52
LMO4P61968 OR52H2P-201ENST00000514607 902 ntBASIC5.58□□□□□ -1.52
LMO4P61968 RNA5SP473-201ENST00000516402 125 ntBASIC5.58□□□□□ -1.52
LMO4P61968 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.58□□□□□ -1.52
LMO4P61968 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC5.58□□□□□ -1.52
LMO4P61968 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 AC025283.1-201ENST00000572039 734 ntBASIC5.58□□□□□ -1.52
LMO4P61968 GTF2IP6-201ENST00000583143 541 ntBASIC5.58□□□□□ -1.52
LMO4P61968 AC245052.7-201ENST00000601161 359 ntBASIC5.58□□□□□ -1.52
LMO4P61968 AC012368.3-201ENST00000604190 219 ntBASIC5.58□□□□□ -1.52
LMO4P61968 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.58□□□□□ -1.52
LMO4P61968 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
LMO4P61968 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LMO4P61968 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
LMO4P61968 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LMO4P61968 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LMO4P61968 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LMO4P61968 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 PSMC1P6-201ENST00000477233 1319 ntBASIC5.57□□□□□ -1.52
LMO4P61968 PSMC1P4-201ENST00000515236 1327 ntBASIC5.57□□□□□ -1.52
LMO4P61968 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LMO4P61968 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LMO4P61968 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LMO4P61968 RNU1-55P-201ENST00000365510 158 ntBASIC5.57□□□□□ -1.52
LMO4P61968 RN7SKP187-201ENST00000365536 330 ntBASIC5.57□□□□□ -1.52
LMO4P61968 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LMO4P61968 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.57□□□□□ -1.52
LMO4P61968 RN7SKP271-201ENST00000410528 320 ntBASIC5.57□□□□□ -1.52
LMO4P61968 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AL359885.1-201ENST00000415786 903 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC5.57□□□□□ -1.52
LMO4P61968 AC239367.3-201ENST00000428996 814 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 AL645939.3-201ENST00000435408 225 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AC007383.1-201ENST00000445875 636 ntBASIC5.57□□□□□ -1.52
LMO4P61968 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LMO4P61968 AC236972.4-201ENST00000458091 963 ntBASIC5.57□□□□□ -1.52
LMO4P61968 MARK2P8-201ENST00000476069 952 ntBASIC5.57□□□□□ -1.52
LMO4P61968 RN7SL413P-201ENST00000482700 297 ntBASIC5.57□□□□□ -1.52
LMO4P61968 RN7SL569P-201ENST00000494652 288 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.57□□□□□ -1.52
LMO4P61968 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.57□□□□□ -1.52
LMO4P61968 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.57□□□□□ -1.52
LMO4P61968 AC093816.1-201ENST00000515076 913 ntBASIC5.57□□□□□ -1.52
LMO4P61968 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.57□□□□□ -1.52
LMO4P61968 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.57□□□□□ -1.52
LMO4P61968 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms