Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC241377.2-202ENST00000636462 997 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 AC027279.4-201ENST00000624371 2072 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CKS1BP61024 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 HSPA8P14-201ENST00000552265 1805 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.83□□□□□ -1.64
CKS1BP61024 AL353796.1-201ENST00000561542 3241 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 MED6-212ENST00000615788 1700 ntTSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CKS1BP61024 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 CDY7P-201ENST00000429883 1604 ntBASIC4.83□□□□□ -1.64
CKS1BP61024 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.83□□□□□ -1.64
CKS1BP61024 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC4.82□□□□□ -1.64
CKS1BP61024 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 AL161756.3-201ENST00000641216 2071 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CKS1BP61024 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
CKS1BP61024 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 RN7SKP81-201ENST00000365603 331 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 AC133644.1-201ENST00000398171 937 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 CTSLP8-201ENST00000413075 967 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 GAPDHP46-201ENST00000424043 994 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 DDX11L10-201ENST00000430178 571 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 RPL5P27-201ENST00000437011 881 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 LAPTM4BP1-201ENST00000447781 690 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AL590648.1-201ENST00000456479 460 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AC008799.2-201ENST00000484429 647 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 OR4A1P-201ENST00000532342 920 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC126177.6-201ENST00000550420 1009 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC005479.1-201ENST00000554629 451 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC4.82□□□□□ -1.64
CKS1BP61024 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 CYP4A26P-201ENST00000563017 196 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC009171.1-201ENST00000572673 266 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.82□□□□□ -1.64
CKS1BP61024 AC063977.7-201ENST00000594454 337 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 MIR6761-201ENST00000617899 72 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 EIF5P2-201ENST00000618904 1035 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 MIR6754-201ENST00000621121 66 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 AC005383.1-201ENST00000622689 534 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.82□□□□□ -1.64
CKS1BP61024 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 GAS2-210ENST00000630668 674 ntTSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 AL590396.3-201ENST00000636334 300 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 AL359694.2-201ENST00000567753 1615 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CKS1BP61024 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CKS1BP61024 PARP4P2-201ENST00000446672 3326 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CKS1BP61024 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 AL035563.1-201ENST00000609087 1539 ntBASIC4.82□□□□□ -1.64
CKS1BP61024 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CKS1BP61024 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CKS1BP61024 AL591135.1-201ENST00000401578 5914 ntBASIC4.81□□□□□ -1.64
CKS1BP61024 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CKS1BP61024 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.81□□□□□ -1.64
CKS1BP61024 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms