Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SRP9P49458 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SRP9P49458 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SRP9P49458 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SRP9P49458 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SRP9P49458 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SRP9P49458 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SRP9P49458 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SRP9P49458 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.06□□□□□ -1.44
SRP9P49458 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
SRP9P49458 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.06□□□□□ -1.44
SRP9P49458 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.06□□□□□ -1.44
SRP9P49458 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
SRP9P49458 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 AC073365.1-203ENST00000641055 1992 ntBASIC6.06□□□□□ -1.44
SRP9P49458 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SRP9P49458 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 RNA5SP333-201ENST00000363466 118 ntBASIC6.06□□□□□ -1.44
SRP9P49458 RNA5SP334-201ENST00000364825 118 ntBASIC6.06□□□□□ -1.44
SRP9P49458 MIR541-201ENST00000401360 84 ntBASIC6.06□□□□□ -1.44
SRP9P49458 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.06□□□□□ -1.44
SRP9P49458 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 RN7SKP117-201ENST00000410175 264 ntBASIC6.06□□□□□ -1.44
SRP9P49458 RNU4-64P-201ENST00000410795 131 ntBASIC6.06□□□□□ -1.44
SRP9P49458 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 NRIR-202ENST00000414795 506 ntTSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 EIF4A1P13-201ENST00000415667 230 ntBASIC6.06□□□□□ -1.44
SRP9P49458 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.06□□□□□ -1.44
SRP9P49458 RPL29P7-201ENST00000440227 457 ntBASIC6.06□□□□□ -1.44
SRP9P49458 AC239800.1-201ENST00000442049 719 ntBASIC6.06□□□□□ -1.44
SRP9P49458 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 AL591122.1-201ENST00000487348 492 ntBASIC6.06□□□□□ -1.44
SRP9P49458 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 SCARNA18.2-201ENST00000516882 84 ntBASIC6.06□□□□□ -1.44
SRP9P49458 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 AC024451.4-201ENST00000602578 752 ntBASIC6.06□□□□□ -1.44
SRP9P49458 AL031429.2-201ENST00000602605 649 ntBASIC6.06□□□□□ -1.44
SRP9P49458 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.06□□□□□ -1.44
SRP9P49458 AC012510.1-201ENST00000607946 759 ntBASIC6.06□□□□□ -1.44
SRP9P49458 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.06□□□□□ -1.44
SRP9P49458 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.06□□□□□ -1.44
SRP9P49458 AP000547.3-204ENST00000588548 2523 ntBASIC6.06□□□□□ -1.44
SRP9P49458 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.06□□□□□ -1.44
SRP9P49458 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SRP9P49458 AC130360.2-201ENST00000533477 1556 ntBASIC6.06□□□□□ -1.44
SRP9P49458 AC022306.1-201ENST00000560489 1562 ntBASIC6.06□□□□□ -1.44
SRP9P49458 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SRP9P49458 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.05□□□□□ -1.44
SRP9P49458 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.05□□□□□ -1.44
SRP9P49458 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.05□□□□□ -1.44
SRP9P49458 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SRP9P49458 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SRP9P49458 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 AC013488.1-201ENST00000526618 1838 ntBASIC6.05□□□□□ -1.44
SRP9P49458 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.05□□□□□ -1.44
SRP9P49458 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 RPL10P16-201ENST00000325000 645 ntBASIC6.05□□□□□ -1.44
SRP9P49458 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SRP9P49458 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.05□□□□□ -1.44
SRP9P49458 RN7SKP254-201ENST00000410685 310 ntBASIC6.05□□□□□ -1.44
SRP9P49458 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.05□□□□□ -1.44
SRP9P49458 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.05□□□□□ -1.44
SRP9P49458 VDAC1P10-201ENST00000416715 891 ntBASIC6.05□□□□□ -1.44
SRP9P49458 NME1P1-201ENST00000420914 382 ntBASIC6.05□□□□□ -1.44
SRP9P49458 FDPSP6-201ENST00000425091 512 ntBASIC6.05□□□□□ -1.44
SRP9P49458 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.05□□□□□ -1.44
SRP9P49458 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.05□□□□□ -1.44
SRP9P49458 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.05□□□□□ -1.44
SRP9P49458 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.05□□□□□ -1.44
SRP9P49458 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SRP9P49458 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SRP9P49458 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms