Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CIITAP33076 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CIITAP33076 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 ASNSP6-201ENST00000592770 1618 ntBASIC7.67□□□□□ -1.18
CIITAP33076 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CIITAP33076 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 AC004023.1-201ENST00000561473 1744 ntBASIC7.67□□□□□ -1.18
CIITAP33076 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 AC123769.2-201ENST00000624332 5984 ntBASIC7.67□□□□□ -1.18
CIITAP33076 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.67□□□□□ -1.18
CIITAP33076 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CIITAP33076 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.67□□□□□ -1.18
CIITAP33076 RNU1-5P-201ENST00000362684 144 ntBASIC7.67□□□□□ -1.18
CIITAP33076 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 FDPSP5-201ENST00000399474 1057 ntBASIC7.67□□□□□ -1.18
CIITAP33076 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 CDC42P6-201ENST00000421246 576 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 PAICSP2-201ENST00000429118 1150 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 RN7SL83P-201ENST00000468131 297 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AC099340.1-201ENST00000475247 599 ntBASIC7.67□□□□□ -1.18
CIITAP33076 RN7SL382P-201ENST00000482631 282 ntBASIC7.67□□□□□ -1.18
CIITAP33076 RPL5P33-201ENST00000487833 905 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AC114324.2-202ENST00000503812 134 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.67□□□□□ -1.18
CIITAP33076 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 RN7SKP196-201ENST00000516267 345 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.67□□□□□ -1.18
CIITAP33076 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.67□□□□□ -1.18
CIITAP33076 AC103968.1-201ENST00000557841 573 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 RPL7AP69-201ENST00000595306 806 ntBASIC7.67□□□□□ -1.18
CIITAP33076 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.67□□□□□ -1.18
CIITAP33076 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC7.67□□□□□ -1.18
CIITAP33076 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.67□□□□□ -1.18
CIITAP33076 AL138693.1-201ENST00000622219 129 ntBASIC7.67□□□□□ -1.18
CIITAP33076 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
CIITAP33076 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.67□□□□□ -1.18
CIITAP33076 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 XKRY2-202ENST00000623874 1581 ntBASIC7.67□□□□□ -1.18
CIITAP33076 XKRY-202ENST00000624960 1581 ntBASIC7.67□□□□□ -1.18
CIITAP33076 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.67□□□□□ -1.18
CIITAP33076 AP005139.1-201ENST00000580702 1647 ntBASIC7.67□□□□□ -1.18
CIITAP33076 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CIITAP33076 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
CIITAP33076 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.66□□□□□ -1.18
CIITAP33076 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CIITAP33076 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CIITAP33076 AC093278.2-201ENST00000564956 2485 ntBASIC7.66□□□□□ -1.18
CIITAP33076 AC010894.1-201ENST00000313760 361 ntBASIC7.66□□□□□ -1.18
CIITAP33076 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CIITAP33076 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 RNU1-55P-201ENST00000365510 158 ntBASIC7.66□□□□□ -1.18
CIITAP33076 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CIITAP33076 AL663061.1-201ENST00000416625 580 ntBASIC7.66□□□□□ -1.18
CIITAP33076 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.66□□□□□ -1.18
CIITAP33076 AC239367.3-201ENST00000428996 814 ntBASIC7.66□□□□□ -1.18
CIITAP33076 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.66□□□□□ -1.18
CIITAP33076 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.66□□□□□ -1.18
CIITAP33076 PSMD8P1-201ENST00000436275 769 ntBASIC7.66□□□□□ -1.18
CIITAP33076 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC7.66□□□□□ -1.18
CIITAP33076 AC234771.4-201ENST00000441416 730 ntBASIC7.66□□□□□ -1.18
CIITAP33076 WDR82P2-201ENST00000444540 928 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms