Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.87□□□□□ -1.15
COL4A5P29400 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 AL355974.1-201ENST00000618896 1708 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
COL4A5P29400 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.87□□□□□ -1.15
COL4A5P29400 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.87□□□□□ -1.15
COL4A5P29400 RPL7L1P11-201ENST00000446092 721 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 AL133351.3-201ENST00000454998 193 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 AC023194.2-201ENST00000465398 406 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 RPL12P31-201ENST00000478433 450 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 AC112225.1-201ENST00000508230 297 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 AC114781.3-201ENST00000512083 142 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.87□□□□□ -1.15
COL4A5P29400 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.87□□□□□ -1.15
COL4A5P29400 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.87□□□□□ -1.15
COL4A5P29400 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.87□□□□□ -1.15
COL4A5P29400 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.87□□□□□ -1.15
COL4A5P29400 AC005229.3-201ENST00000603438 323 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 AC022467.1-201ENST00000614738 749 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 AL512652.1-201ENST00000619006 500 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 FAM27E2-201ENST00000619668 403 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.87□□□□□ -1.15
COL4A5P29400 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 AC093278.2-201ENST00000564956 2485 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
COL4A5P29400 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.87□□□□□ -1.15
COL4A5P29400 XRCC6P5-201ENST00000435236 1795 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC7.87□□□□□ -1.15
COL4A5P29400 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
COL4A5P29400 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.87□□□□□ -1.15
COL4A5P29400 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.87□□□□□ -1.15
COL4A5P29400 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.87□□□□□ -1.15
COL4A5P29400 RARSP1-201ENST00000542842 1418 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 Z97832.2-201ENST00000605896 4261 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL4A5P29400 AL359694.2-201ENST00000567753 1615 ntBASIC7.87□□□□□ -1.15
COL4A5P29400 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
COL4A5P29400 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 TMSB4XP4-201ENST00000323496 618 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 RNA5SP242-201ENST00000364171 118 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC7.86□□□□□ -1.15
COL4A5P29400 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 OTX2-203ENST00000554559 715 ntTSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.86□□□□□ -1.15
COL4A5P29400 AL049840.5-201ENST00000602827 552 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
COL4A5P29400 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.86□□□□□ -1.15
COL4A5P29400 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.86□□□□□ -1.15
COL4A5P29400 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 PHF2P2-202ENST00000444553 2865 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 GRIK2-202ENST00000358361 1981 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 AL136984.1-201ENST00000607611 1893 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 AL353743.3-201ENST00000442109 1468 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
COL4A5P29400 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.86□□□□□ -1.15
COL4A5P29400 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.86□□□□□ -1.15
COL4A5P29400 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.86□□□□□ -1.15
COL4A5P29400 Z93019.1-201ENST00000416450 973 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 BRWD1P3-201ENST00000428816 390 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC7.86□□□□□ -1.15
COL4A5P29400 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.86□□□□□ -1.15
COL4A5P29400 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.86□□□□□ -1.15
COL4A5P29400 AL513548.2-201ENST00000602994 1207 ntBASIC7.86□□□□□ -1.15
COL4A5P29400 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL4A5P29400 AC083806.2-201ENST00000617795 2685 ntBASIC7.85□□□□□ -1.15
COL4A5P29400 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
COL4A5P29400 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.85□□□□□ -1.15
COL4A5P29400 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL4A5P29400 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms