Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 AC005332.9-201ENST00000620266 2921 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AL139384.2-201ENST00000613809 3590 ntBASIC5.8□□□□□ -1.48
CCL1P22362 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
CCL1P22362 MKI67P1-201ENST00000604297 1460 ntBASIC5.79□□□□□ -1.48
CCL1P22362 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
CCL1P22362 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 AC122713.2-201ENST00000624942 3335 ntBASIC5.79□□□□□ -1.48
CCL1P22362 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCL1P22362 RNU1-56P-201ENST00000391303 164 ntBASIC5.79□□□□□ -1.48
CCL1P22362 PDCL3P5-201ENST00000398028 722 ntBASIC5.79□□□□□ -1.48
CCL1P22362 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.79□□□□□ -1.48
CCL1P22362 RN7SKP268-201ENST00000411107 316 ntBASIC5.79□□□□□ -1.48
CCL1P22362 RN7SKP296-201ENST00000411185 341 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AL359633.1-201ENST00000421403 310 ntBASIC5.79□□□□□ -1.48
CCL1P22362 CYCSP52-201ENST00000422857 310 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AL139415.1-201ENST00000424862 352 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.79□□□□□ -1.48
CCL1P22362 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCL1P22362 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.79□□□□□ -1.48
CCL1P22362 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.79□□□□□ -1.48
CCL1P22362 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC5.79□□□□□ -1.48
CCL1P22362 RPL5P15-201ENST00000475870 897 ntBASIC5.79□□□□□ -1.48
CCL1P22362 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCL1P22362 AC021820.1-201ENST00000525564 808 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.79□□□□□ -1.48
CCL1P22362 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.79□□□□□ -1.48
CCL1P22362 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCL1P22362 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 PPIAP6-201ENST00000557078 499 ntBASIC5.79□□□□□ -1.48
CCL1P22362 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.79□□□□□ -1.48
CCL1P22362 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC5.79□□□□□ -1.48
CCL1P22362 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.79□□□□□ -1.48
CCL1P22362 AC244034.2-201ENST00000562504 509 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.79□□□□□ -1.48
CCL1P22362 AC233699.1-201ENST00000569955 1168 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.79□□□□□ -1.48
CCL1P22362 WDR45BP1-201ENST00000583470 1029 ntBASIC5.79□□□□□ -1.48
CCL1P22362 ACTG1P22-201ENST00000603793 1099 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AL035417.2-201ENST00000603887 796 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC091193.1-201ENST00000604640 448 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC025171.4-201ENST00000607250 1047 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC004839.1-201ENST00000610269 501 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC079414.3-201ENST00000612986 1090 ntBASIC5.79□□□□□ -1.48
CCL1P22362 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCL1P22362 MIR665-201ENST00000635949 72 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC140479.4-205ENST00000636339 820 ntBASIC5.79□□□□□ -1.48
CCL1P22362 AC243725.1-201ENST00000637164 436 ntBASIC5.79□□□□□ -1.48
CCL1P22362 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.79□□□□□ -1.48
CCL1P22362 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
CCL1P22362 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCL1P22362 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.79□□□□□ -1.48
CCL1P22362 AC010624.4-201ENST00000597606 1351 ntBASIC5.79□□□□□ -1.48
CCL1P22362 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.79□□□□□ -1.48
CCL1P22362 SALL4P7-201ENST00000555779 3120 ntBASIC5.79□□□□□ -1.48
CCL1P22362 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.79□□□□□ -1.48
CCL1P22362 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
CCL1P22362 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.78□□□□□ -1.48
CCL1P22362 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 AC110373.1-201ENST00000505994 3505 ntBASIC5.78□□□□□ -1.48
CCL1P22362 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CCL1P22362 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.78□□□□□ -1.48
CCL1P22362 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 FAM32BP-201ENST00000344033 333 ntBASIC5.78□□□□□ -1.48
CCL1P22362 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 RNU1-46P-201ENST00000384425 164 ntBASIC5.78□□□□□ -1.48
CCL1P22362 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCL1P22362 SNORA11D-201ENST00000408548 128 ntBASIC5.78□□□□□ -1.48
CCL1P22362 SNORA11E-201ENST00000408778 128 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms