Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RNA5SP500-201ENST00000364486 119 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 RPL34P3-201ENST00000421454 338 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 CFL1P1-202ENST00000432948 411 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AC103563.5-201ENST00000455643 364 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 MTND6P8-201ENST00000503471 522 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 IGHV4-55-201ENST00000520889 368 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 SAA3P-201ENST00000533267 365 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AL445670.1-201ENST00000618889 801 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AL133243.2-201ENST00000610331 1621 ntBASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AC011294.1-202ENST00000451905 1947 ntTSL 2 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 ANGEL2-202ENST00000366962 4649 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
RIMBP3Q9UFD9 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 AC125603.4-201ENST00000621942 2699 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 EIF4BP5-201ENST00000567338 1795 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 RN7SL643P-201ENST00000471845 291 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 CEACAMP10-202ENST00000495431 496 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 EEF1B2P2-201ENST00000519625 676 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 AL512310.9-201ENST00000553311 948 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 uc_338.18-201ENST00000615451 175 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 AC005393.1-201ENST00000617916 584 ntBASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 GPRC5D-AS1-202ENST00000499948 1746 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 ZNF322-208ENST00000622479 4882 ntAPPRIS P1 TSL 4 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 ZNF275-202ENST00000370251 6320 ntTSL 2 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC10.34□□□□□ -0.75
RIMBP3Q9UFD9 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.75
RIMBP3Q9UFD9 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC011416.1-201ENST00000514947 1732 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC091132.4-201ENST00000587960 2262 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 GAPDHP24-201ENST00000328713 983 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC091078.2-201ENST00000557145 559 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AL049539.1-201ENST00000611964 459 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 PSG10P-201ENST00000501199 1500 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 MIR23A-201ENST00000385245 73 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 RN7SKP281-201ENST00000410472 352 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 GAPDHP51-201ENST00000426454 1000 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 OR3D1P-201ENST00000438288 955 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 RN7SL808P-201ENST00000496066 299 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC084337.1-201ENST00000524809 686 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 MIR6085-201ENST00000618314 110 ntBASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC10.33□□□□□ -0.76
RIMBP3Q9UFD9 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms