Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 OR13D3P-201ENST00000412501 937 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AL122003.1-201ENST00000435206 784 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AL592437.1-201ENST00000443781 492 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RPSAP76-201ENST00000444599 853 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 PCMTD1P3-201ENST00000451824 472 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RPL7L1P3-201ENST00000455249 689 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 PET100-201ENST00000456958 219 ntTSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RPL7P18-201ENST00000478965 734 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 KLF7P1-201ENST00000490941 1048 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RN7SL472P-201ENST00000492799 293 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 HSPE1P23-201ENST00000509838 286 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC083906.4-201ENST00000514634 987 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 MTCO1P35-201ENST00000515270 228 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RNA5SP159-201ENST00000517161 103 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 ATP6V1G1P2-201ENST00000522436 346 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC121758.1-202ENST00000556917 658 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC048380.2-201ENST00000624725 3548 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 Z97200.1-201ENST00000606154 2045 ntBASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
SCUBE3Q8IX30 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC008124.1-201ENST00000609803 9730 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 MAPK10-248ENST00000640490 2715 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 Y_RNA.9-201ENST00000362354 101 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RNA5SP141-201ENST00000364543 120 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RN7SKP133-201ENST00000364845 340 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 MIR146B-201ENST00000365699 73 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 HMGB1P10-201ENST00000395823 563 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 OLA1P1-201ENST00000396387 1189 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RN7SKP168-201ENST00000410910 300 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RPL21P33-201ENST00000444831 484 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 BX322784.1-201ENST00000455793 1077 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RPL5P13-201ENST00000462840 709 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RN7SL77P-201ENST00000473332 294 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC008638.2-201ENST00000503840 715 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 OR7E85P-201ENST00000512164 985 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 IGHVIII-38-1-201ENST00000521454 282 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC006065.2-201ENST00000536978 211 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms