Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.84□□□□□ -1.15
POLR2AP24928 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.84□□□□□ -1.15
POLR2AP24928 AC093283.1-201ENST00000565306 1075 ntBASIC7.84□□□□□ -1.15
POLR2AP24928 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
POLR2AP24928 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.84□□□□□ -1.15
POLR2AP24928 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC7.84□□□□□ -1.15
POLR2AP24928 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.84□□□□□ -1.15
POLR2AP24928 AC005229.3-201ENST00000603438 323 ntBASIC7.84□□□□□ -1.15
POLR2AP24928 AL158211.2-201ENST00000607282 395 ntBASIC7.84□□□□□ -1.15
POLR2AP24928 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.84□□□□□ -1.15
POLR2AP24928 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.84□□□□□ -1.15
POLR2AP24928 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
POLR2AP24928 AC103703.1-201ENST00000634783 663 ntBASIC7.84□□□□□ -1.15
POLR2AP24928 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
POLR2AP24928 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
POLR2AP24928 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.84□□□□□ -1.15
POLR2AP24928 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
POLR2AP24928 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.84□□□□□ -1.16
POLR2AP24928 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
POLR2AP24928 ERVV-1-201ENST00000602168 2202 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
POLR2AP24928 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.83□□□□□ -1.16
POLR2AP24928 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.83□□□□□ -1.16
POLR2AP24928 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
POLR2AP24928 AC087752.1-201ENST00000391360 558 ntBASIC7.83□□□□□ -1.16
POLR2AP24928 MTND2P12-201ENST00000417560 1252 ntBASIC7.83□□□□□ -1.16
POLR2AP24928 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.83□□□□□ -1.16
POLR2AP24928 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.83□□□□□ -1.16
POLR2AP24928 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.83□□□□□ -1.16
POLR2AP24928 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
POLR2AP24928 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.83□□□□□ -1.16
POLR2AP24928 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 ERG-204ENST00000398907 4809 ntTSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.83□□□□□ -1.16
POLR2AP24928 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
POLR2AP24928 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.83□□□□□ -1.16
POLR2AP24928 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
POLR2AP24928 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
POLR2AP24928 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
POLR2AP24928 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
POLR2AP24928 PAICSP2-201ENST00000429118 1150 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.82□□□□□ -1.16
POLR2AP24928 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.82□□□□□ -1.16
POLR2AP24928 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.82□□□□□ -1.16
POLR2AP24928 AC133965.1-201ENST00000452984 354 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 AC008945.1-201ENST00000505144 499 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.82□□□□□ -1.16
POLR2AP24928 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.82□□□□□ -1.16
POLR2AP24928 AC011352.2-201ENST00000514574 1016 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.82□□□□□ -1.16
POLR2AP24928 AP005136.2-201ENST00000583253 1049 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
POLR2AP24928 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.82□□□□□ -1.16
POLR2AP24928 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 AC105046.1-201ENST00000566457 4997 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 PSMC1P6-201ENST00000477233 1319 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.82□□□□□ -1.16
POLR2AP24928 Z97989.1-201ENST00000531702 2421 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
POLR2AP24928 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.82□□□□□ -1.16
POLR2AP24928 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC7.82□□□□□ -1.16
POLR2AP24928 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
POLR2AP24928 RSL24D1P2-201ENST00000445584 366 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 AL034399.1-201ENST00000451535 380 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.82□□□□□ -1.16
POLR2AP24928 RBBP4P1-201ENST00000502424 1276 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 AC008638.1-201ENST00000506035 866 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 AC090022.1-201ENST00000546569 311 ntBASIC7.82□□□□□ -1.16
POLR2AP24928 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.82□□□□□ -1.16
POLR2AP24928 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
POLR2AP24928 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
POLR2AP24928 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.82□□□□□ -1.16
POLR2AP24928 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms