Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.85□□□□□ -1.31
CDH3P22223 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 CCAT2-201ENST00000630920 1752 ntBASIC6.85□□□□□ -1.31
CDH3P22223 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH3P22223 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CDH3P22223 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH3P22223 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 AC090774.4-201ENST00000578888 1372 ntBASIC6.84□□□□□ -1.31
CDH3P22223 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH3P22223 AL033543.1-201ENST00000623440 13454 ntBASIC6.84□□□□□ -1.31
CDH3P22223 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 RN7SKP254-201ENST00000410685 310 ntBASIC6.84□□□□□ -1.31
CDH3P22223 RNU4-64P-201ENST00000410795 131 ntBASIC6.84□□□□□ -1.31
CDH3P22223 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 PUDPP2-201ENST00000431423 643 ntBASIC6.84□□□□□ -1.31
CDH3P22223 AC027124.1-201ENST00000440852 466 ntBASIC6.84□□□□□ -1.31
CDH3P22223 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.84□□□□□ -1.31
CDH3P22223 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 OR5M6P-201ENST00000530227 937 ntBASIC6.84□□□□□ -1.31
CDH3P22223 SAA3P-201ENST00000533267 365 ntBASIC6.84□□□□□ -1.31
CDH3P22223 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.84□□□□□ -1.31
CDH3P22223 AC013283.1-201ENST00000557282 492 ntBASIC6.84□□□□□ -1.31
CDH3P22223 RN7SL426P-201ENST00000579106 295 ntBASIC6.84□□□□□ -1.31
CDH3P22223 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC6.84□□□□□ -1.31
CDH3P22223 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.84□□□□□ -1.31
CDH3P22223 SIGLEC31P-201ENST00000594237 551 ntBASIC6.84□□□□□ -1.31
CDH3P22223 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.84□□□□□ -1.31
CDH3P22223 AC018690.1-201ENST00000608144 626 ntBASIC6.84□□□□□ -1.31
CDH3P22223 AC097641.3-201ENST00000613523 464 ntBASIC6.84□□□□□ -1.31
CDH3P22223 AC245407.2-201ENST00000614199 451 ntBASIC6.84□□□□□ -1.31
CDH3P22223 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.84□□□□□ -1.31
CDH3P22223 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CDH3P22223 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CDH3P22223 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CDH3P22223 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.84□□□□□ -1.32
CDH3P22223 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
CDH3P22223 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CDH3P22223 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.83□□□□□ -1.32
CDH3P22223 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CDH3P22223 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 AC090771.1-201ENST00000585803 1618 ntBASIC6.83□□□□□ -1.32
CDH3P22223 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CDH3P22223 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH3P22223 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 RNU6-1017P-201ENST00000363613 106 ntBASIC6.83□□□□□ -1.32
CDH3P22223 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
CDH3P22223 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.83□□□□□ -1.32
CDH3P22223 MTND6P1-201ENST00000417434 424 ntBASIC6.83□□□□□ -1.32
CDH3P22223 GAPDHP69-201ENST00000425504 1008 ntBASIC6.83□□□□□ -1.32
CDH3P22223 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.83□□□□□ -1.32
CDH3P22223 AC009518.3-201ENST00000438972 253 ntBASIC6.83□□□□□ -1.32
CDH3P22223 OR7E7P-201ENST00000455678 1012 ntBASIC6.83□□□□□ -1.32
CDH3P22223 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH3P22223 AL354872.1-201ENST00000456361 967 ntBASIC6.83□□□□□ -1.32
CDH3P22223 BX323845.2-201ENST00000458382 234 ntBASIC6.83□□□□□ -1.32
CDH3P22223 SNORA81.1-201ENST00000458922 177 ntBASIC6.83□□□□□ -1.32
CDH3P22223 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH3P22223 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH3P22223 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.83□□□□□ -1.32
CDH3P22223 AC122714.1-201ENST00000502510 459 ntBASIC6.83□□□□□ -1.32
CDH3P22223 AC008868.1-201ENST00000509786 737 ntBASIC6.83□□□□□ -1.32
CDH3P22223 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.83□□□□□ -1.32
CDH3P22223 AC130366.1-201ENST00000526505 1192 ntBASIC6.83□□□□□ -1.32
CDH3P22223 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.83□□□□□ -1.32
CDH3P22223 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH3P22223 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH3P22223 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH3P22223 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.83□□□□□ -1.32
CDH3P22223 AL591222.2-201ENST00000604443 754 ntBASIC6.83□□□□□ -1.32
CDH3P22223 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.83□□□□□ -1.32
CDH3P22223 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
CDH3P22223 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH3P22223 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.83□□□□□ -1.32
CDH3P22223 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CDH3P22223 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms