Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 Z93929.1-201ENST00000418200 1475 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 DDX10P2-201ENST00000417796 2614 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
COL6A2P12110 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 AL034372.1-201ENST00000407586 754 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 EEF1GP7-201ENST00000422983 703 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 NPM1P25-201ENST00000429734 854 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 RPS13P2-201ENST00000437890 455 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 RPS29P5-201ENST00000452777 171 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.25□□□□□ -1.25
COL6A2P12110 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.25□□□□□ -1.25
COL6A2P12110 RN7SL124P-201ENST00000498656 285 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 PABPC1P1-201ENST00000506347 591 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.25□□□□□ -1.25
COL6A2P12110 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.25□□□□□ -1.25
COL6A2P12110 OR8K4P-201ENST00000534608 872 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 MIR3135A-201ENST00000578460 77 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC090699.1-201ENST00000586264 321 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 MIMT1-201ENST00000597105 1050 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AL355333.1-201ENST00000605632 279 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC139792.1-201ENST00000607051 647 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC004775.1-201ENST00000607389 753 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 AL590560.2-201ENST00000608430 732 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC7.25□□□□□ -1.25
COL6A2P12110 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 MIR6762-201ENST00000613340 86 ntBASIC7.25□□□□□ -1.25
COL6A2P12110 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL6A2P12110 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
COL6A2P12110 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
COL6A2P12110 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
COL6A2P12110 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 CASP4-201ENST00000393150 1340 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL6A2P12110 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 AC083806.2-201ENST00000617795 2685 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 AC079178.2-201ENST00000439323 1624 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 RN7SKP63-201ENST00000363187 301 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 MIR199B-201ENST00000384849 110 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 RN7SKP131-201ENST00000410698 301 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AL773545.3-201ENST00000414297 706 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 MTND4LP21-201ENST00000415303 295 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 RPL23AP34-201ENST00000423483 410 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 AL596268.1-201ENST00000427910 1048 ntBASIC7.24□□□□□ -1.25
COL6A2P12110 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL6A2P12110 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC098483.1-202ENST00000436515 967 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.24□□□□□ -1.25
COL6A2P12110 AC006326.1-201ENST00000445465 787 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms