Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 AC092568.1-201ENST00000440950 1284 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 OR51P1P-201ENST00000447547 942 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 PYM1-204ENST00000454792 884 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 TAAR3P-201ENST00000466706 1078 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 RN7SL520P-201ENST00000474110 286 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 RN7SL549P-201ENST00000478997 282 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 OR7E163P-201ENST00000505943 894 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC5.19□□□□□ -1.58
CXCL1P09341 AC008417.1-201ENST00000510014 565 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 AP001124.1-201ENST00000529628 385 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 OR7E2P-201ENST00000533071 889 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC5.19□□□□□ -1.58
CXCL1P09341 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC5.19□□□□□ -1.58
CXCL1P09341 RN7SL667P-201ENST00000582817 298 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 PFN1P2-202ENST00000621347 397 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 AC009120.7-201ENST00000623452 780 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CXCL1P09341 AL359263.1-201ENST00000441188 2796 ntBASIC5.19□□□□□ -1.58
CXCL1P09341 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC5.19□□□□□ -1.58
CXCL1P09341 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.19□□□□□ -1.58
CXCL1P09341 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL1P09341 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL1P09341 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CXCL1P09341 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL1P09341 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL1P09341 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 AC011815.2-201ENST00000618230 2021 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL1P09341 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL1P09341 AL136298.2-201ENST00000556497 1570 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
CXCL1P09341 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CXCL1P09341 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL1P09341 TMED5-201ENST00000370280 750 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 RPL12P1-201ENST00000374520 498 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 PTMAP8-201ENST00000397729 342 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.18□□□□□ -1.58
CXCL1P09341 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL1P09341 RPL6P2-201ENST00000425480 783 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL1P09341 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL1P09341 EIF3IP1-201ENST00000433048 967 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 NQO1-204ENST00000439109 924 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 AC009237.1-201ENST00000442127 744 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 RPSAP49-201ENST00000445182 886 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 SDHCP3-201ENST00000445371 506 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL1P09341 OR7E62P-201ENST00000456741 477 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 SNORA81.1-201ENST00000458922 177 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AC026254.1-201ENST00000479473 431 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 NPM1P27-201ENST00000502784 830 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AC021220.1-201ENST00000507445 630 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AC026700.1-201ENST00000512074 544 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL1P09341 IGLV10-67-201ENST00000519446 325 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 IGHV3-57-201ENST00000520143 280 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 OR52K3P-201ENST00000531655 943 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL1P09341 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
CXCL1P09341 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC5.18□□□□□ -1.58
CXCL1P09341 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.18□□□□□ -1.58
CXCL1P09341 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL1P09341 RN7SL371P-201ENST00000578099 267 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 RN7SL199P-201ENST00000578752 281 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 RN7SL656P-201ENST00000579044 281 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC5.18□□□□□ -1.58
CXCL1P09341 RN7SL404P-201ENST00000582421 281 ntBASIC5.18□□□□□ -1.58
CXCL1P09341 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC5.18□□□□□ -1.58
CXCL1P09341 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC5.18□□□□□ -1.58
CXCL1P09341 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms