Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX4O60224 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 MAPK10-261ENST00000641050 3109 ntBASIC6.32□□□□□ -1.4
SSX4O60224 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 OGFOD1P1-201ENST00000447552 1592 ntBASIC6.32□□□□□ -1.4
SSX4O60224 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX4O60224 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX4O60224 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 AL078621.1-201ENST00000272567 768 ntBASIC6.32□□□□□ -1.4
SSX4O60224 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX4O60224 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX4O60224 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 MRPL32P1-201ENST00000406301 247 ntBASIC6.32□□□□□ -1.4
SSX4O60224 MICG-208ENST00000416822 132 ntBASIC6.32□□□□□ -1.4
SSX4O60224 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX4O60224 PA2G4P1-201ENST00000442248 1197 ntBASIC6.32□□□□□ -1.4
SSX4O60224 LIN28AP2-201ENST00000445283 458 ntBASIC6.32□□□□□ -1.4
SSX4O60224 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX4O60224 AL157385.1-201ENST00000446973 268 ntBASIC6.32□□□□□ -1.4
SSX4O60224 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX4O60224 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 AC025271.1-201ENST00000485045 429 ntBASIC6.32□□□□□ -1.4
SSX4O60224 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX4O60224 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX4O60224 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 AC068790.1-201ENST00000536166 355 ntBASIC6.32□□□□□ -1.4
SSX4O60224 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX4O60224 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX4O60224 MTATP6P25-201ENST00000574491 261 ntBASIC6.32□□□□□ -1.4
SSX4O60224 AC027796.1-201ENST00000575593 512 ntBASIC6.32□□□□□ -1.4
SSX4O60224 SIGLEC31P-201ENST00000594237 551 ntBASIC6.32□□□□□ -1.4
SSX4O60224 AC005518.2-201ENST00000603254 282 ntBASIC6.32□□□□□ -1.4
SSX4O60224 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 AC005618.1-201ENST00000606901 3148 ntBASIC6.32□□□□□ -1.4
SSX4O60224 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX4O60224 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.32□□□□□ -1.4
SSX4O60224 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX4O60224 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 AKAP17BP-201ENST00000431706 2719 ntBASIC6.32□□□□□ -1.4
SSX4O60224 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSX4O60224 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX4O60224 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX4O60224 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX4O60224 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX4O60224 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX4O60224 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX4O60224 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 RBMX2P2-201ENST00000257020 946 ntBASIC6.31□□□□□ -1.4
SSX4O60224 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SSX4O60224 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 SOD1P1-201ENST00000407803 440 ntBASIC6.31□□□□□ -1.4
SSX4O60224 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX4O60224 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 RNA5SP177-201ENST00000410122 107 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AL662791.3-201ENST00000413771 776 ntBASIC6.31□□□□□ -1.4
SSX4O60224 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 VN1R3-201ENST00000418822 919 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX4O60224 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX4O60224 RPL35P8-201ENST00000433284 337 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AL354893.1-201ENST00000433735 348 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX4O60224 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX4O60224 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX4O60224 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX4O60224 RN7SL152P-201ENST00000484176 298 ntBASIC6.31□□□□□ -1.4
SSX4O60224 RPL21P42-201ENST00000488408 464 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX4O60224 GCSHP1-201ENST00000512554 484 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AC008676.3-201ENST00000521237 435 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX4O60224 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX4O60224 AC233290.1-201ENST00000553021 1186 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms