Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 FABP5P1-201ENST00000423401 411 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AL589794.1-201ENST00000424971 390 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 FABP5P2-201ENST00000439042 408 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AL354714.5-201ENST00000450131 590 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RPL7AP71-201ENST00000451120 739 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RN7SL259P-201ENST00000478499 253 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RN7SL379P-201ENST00000479912 293 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RPL12P7-201ENST00000493832 494 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RN7SL612P-201ENST00000497704 295 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 RPL5P11-201ENST00000498068 893 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 MRPL57P6-201ENST00000506570 309 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AC007537.1-201ENST00000539347 327 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AC005479.3-201ENST00000602790 431 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 AC073857.1-201ENST00000625082 1054 ntBASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP2Q9UDT6 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 RBMY1A3P-201ENST00000382670 1404 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 MIR199B-201ENST00000384849 110 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 RN7SKP232-201ENST00000410170 290 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC006509.1-201ENST00000420788 634 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 PA2G4P1-201ENST00000442248 1197 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC022080.2-201ENST00000452932 533 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 RPS26P11-201ENST00000463445 348 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 RN7SL390P-201ENST00000470634 284 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 RPS26P6-201ENST00000475156 348 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC074386.1-206ENST00000487102 761 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 MTCYBP44-201ENST00000514835 823 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC010463.3-201ENST00000594077 500 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 HTR1DP1-201ENST00000616500 888 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 AC048341.3-201ENST00000619323 491 ntBASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CLIP2Q9UDT6 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CLIP2Q9UDT6 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CLIP2Q9UDT6 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CLIP2Q9UDT6 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC8.15□□□□□ -1.11
CLIP2Q9UDT6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
CLIP2Q9UDT6 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CLIP2Q9UDT6 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AC129502.1-201ENST00000623261 1654 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 LARS-212ENST00000510191 3737 ntTSL 2 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AL079341.1-201ENST00000404701 1207 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 RPLP1P10-201ENST00000413972 339 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 GSTA6P-201ENST00000424144 582 ntBASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.14□□□□□ -1.11
CLIP2Q9UDT6 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms