Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RN7SL518P-201ENST00000491887 280 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR4800-201ENST00000537353 80 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL366P-201ENST00000577957 292 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 RN7SL426P-201ENST00000579106 295 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR5010-201ENST00000582846 120 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 WDR45BP1-201ENST00000583470 1029 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC010327.2-201ENST00000587647 488 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC063962.1-201ENST00000608199 521 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR8089-201ENST00000620165 82 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AL356863.1-201ENST00000623378 1080 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AC005753.1-201ENST00000623837 618 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 AL035425.4-201ENST00000624509 1063 ntBASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CDK5RAP1Q96SZ6 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 AC009237.3-203ENST00000442128 3551 ntBASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 AC011592.1-201ENST00000624647 3634 ntBASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CDK5RAP1Q96SZ6 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 PDCL3P5-201ENST00000398028 722 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AL604028.2-201ENST00000437848 788 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 SDHCP3-201ENST00000445371 506 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 SCDP1-201ENST00000455244 1081 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 RBMY2EP-202ENST00000456360 940 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC079193.1-201ENST00000460497 588 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC015908.1-201ENST00000478739 476 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 GLYATL1P4-201ENST00000529326 906 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 MTND5P21-201ENST00000531961 522 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 OR8K4P-201ENST00000534608 872 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC096708.2-201ENST00000577676 512 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 MIR378H-201ENST00000579966 83 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 MIR5682-201ENST00000584864 76 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 OR7E19P-202ENST00000589942 844 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 PTCHD3P1-201ENST00000612350 537 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AL354950.1-201ENST00000614150 568 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC116165.3-201ENST00000614524 400 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AC107905.1-201ENST00000616204 426 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 RN7SL126P-201ENST00000616400 299 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AL139254.2-202ENST00000641937 1156 ntBASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
CDK5RAP1Q96SZ6 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms