Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC096915.1-201ENST00000456185 512 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 H3F3AP3-201ENST00000497682 407 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC026700.1-201ENST00000512074 544 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC008677.3-201ENST00000519146 666 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 EEF1B2P2-201ENST00000519625 676 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 CCDC58P5-201ENST00000536923 432 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 FXNP1-201ENST00000555153 337 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 DPPA3P2-202ENST00000557188 1219 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 RPS7P1-201ENST00000571702 585 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AL360012.1-201ENST00000602813 131 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 PFN1P2-202ENST00000621347 397 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AL353898.2-201ENST00000623000 255 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AL049541.2-201ENST00000626377 555 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC016582.3-206ENST00000636547 207 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 EEF1A1P2-201ENST00000553854 1447 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC133552.1-201ENST00000569988 4007 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 SOCS5P5-201ENST00000402732 1586 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 CST13P-201ENST00000376992 428 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AL355862.1-201ENST00000412705 353 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 MRPS21P2-201ENST00000424704 264 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 GTF2F2P2-201ENST00000445825 721 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 CDC42P2-201ENST00000448566 569 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 RPSAP7-201ENST00000456871 885 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 RN7SL587P-201ENST00000459853 281 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 SNRPCP3-201ENST00000474888 476 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 RN7SL259P-201ENST00000478499 253 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 IGKV2-19-201ENST00000518132 283 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 CRADD-211ENST00000552983 839 ntTSL 5 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 OR4N3P-201ENST00000559395 818 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC243312.1-201ENST00000570582 275 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 RPSAP66-201ENST00000592196 606 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 OR5AH1P-201ENST00000595968 283 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC022239.4-201ENST00000602626 504 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AL390058.1-201ENST00000603834 629 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC023310.4-201ENST00000613130 650 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC135068.4-201ENST00000622949 925 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AP003068.4-201ENST00000623192 802 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AL606490.2-201ENST00000457562 1330 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 AC130456.1-201ENST00000565085 1363 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 TPTE2P2-201ENST00000403471 1466 ntBASIC5.12□□□□□ -1.59
AP1S3Q96PC3 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
AP1S3Q96PC3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms