Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 BMS1P15-201ENST00000554269 1141 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC024451.4-201ENST00000602578 752 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 AL023806.2-201ENST00000603042 263 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 AL136985.2-201ENST00000607372 535 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 AC015871.3-201ENST00000618835 2261 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 TTC41P-205ENST00000551270 3963 ntBASIC6.81□□□□□ -1.32
VMP1Q96GC9 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
VMP1Q96GC9 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
VMP1Q96GC9 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC010401.2-201ENST00000575137 4934 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC090114.1-201ENST00000393266 448 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 RPL24P7-201ENST00000399435 453 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 RN7SKP30-201ENST00000411373 334 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AL593856.1-201ENST00000419949 805 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 RPL34P27-201ENST00000428810 349 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC079781.1-201ENST00000441505 394 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 RN7SL834P-201ENST00000461450 286 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 IGLV1-62-201ENST00000518003 441 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 SAA3P-201ENST00000533267 365 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC233290.1-201ENST00000553021 1186 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC010547.7-201ENST00000570323 333 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 MIR1273F-201ENST00000580581 99 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 RN7SL657P-201ENST00000582431 293 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AP000432.2-201ENST00000624164 2048 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC138627.1-204ENST00000641894 765 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 MAPK10-344ENST00000641718 3746 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC123912.3-201ENST00000600907 1367 ntBASIC6.8□□□□□ -1.32
VMP1Q96GC9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
VMP1Q96GC9 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VMP1Q96GC9 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VMP1Q96GC9 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VMP1Q96GC9 TRIM64EP-201ENST00000531233 1307 ntBASIC6.79□□□□□ -1.32
VMP1Q96GC9 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VMP1Q96GC9 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VMP1Q96GC9 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VMP1Q96GC9 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VMP1Q96GC9 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VMP1Q96GC9 U3.14-201ENST00000365363 227 ntBASIC6.79□□□□□ -1.32
VMP1Q96GC9 RN7SKP117-201ENST00000410175 264 ntBASIC6.79□□□□□ -1.32
VMP1Q96GC9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 AC093799.1-201ENST00000452411 499 ntBASIC6.79□□□□□ -1.32
VMP1Q96GC9 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.79□□□□□ -1.32
VMP1Q96GC9 PABPC1P1-201ENST00000506347 591 ntBASIC6.79□□□□□ -1.32
VMP1Q96GC9 AC095057.1-201ENST00000507583 168 ntBASIC6.79□□□□□ -1.32
VMP1Q96GC9 CHCHD2P7-201ENST00000508008 452 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms