Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
H3F3AP84243 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.15□□□□□ -1.42
H3F3AP84243 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.15□□□□□ -1.42
H3F3AP84243 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H3F3AP84243 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 MIR138-2-201ENST00000384916 84 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H3F3AP84243 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC6.15□□□□□ -1.42
H3F3AP84243 YWHAZP5-201ENST00000419975 730 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.15□□□□□ -1.42
H3F3AP84243 AL845321.1-201ENST00000444603 348 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.15□□□□□ -1.42
H3F3AP84243 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 RBMY2EP-202ENST00000456360 940 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 EIF3LP2-201ENST00000457262 807 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 RN7SL834P-201ENST00000461450 286 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 RPS26P11-201ENST00000463445 348 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 RPS26P6-201ENST00000475156 348 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.15□□□□□ -1.42
H3F3AP84243 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.15□□□□□ -1.42
H3F3AP84243 MTCYBP44-201ENST00000514835 823 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 RNA5SP318-201ENST00000516352 92 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 AP006587.5-201ENST00000532033 739 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 SLC25A51P2-201ENST00000535708 889 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 AC027667.1-201ENST00000545814 304 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.15□□□□□ -1.42
H3F3AP84243 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 AC004908.1-201ENST00000606572 541 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.15□□□□□ -1.42
H3F3AP84243 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.15□□□□□ -1.42
H3F3AP84243 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.15□□□□□ -1.42
H3F3AP84243 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
H3F3AP84243 AL033543.1-201ENST00000623440 13454 ntBASIC6.15□□□□□ -1.43
H3F3AP84243 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
H3F3AP84243 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
H3F3AP84243 AP000866.6-201ENST00000638898 3579 ntBASIC6.15□□□□□ -1.43
H3F3AP84243 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
H3F3AP84243 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.43
H3F3AP84243 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
H3F3AP84243 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.15□□□□□ -1.43
H3F3AP84243 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.15□□□□□ -1.43
H3F3AP84243 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.43
H3F3AP84243 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
H3F3AP84243 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
H3F3AP84243 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
H3F3AP84243 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
H3F3AP84243 RBM26-AS1-202ENST00000606049 2427 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
H3F3AP84243 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
H3F3AP84243 AC097634.1-201ENST00000604491 2467 ntBASIC6.15□□□□□ -1.43
H3F3AP84243 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.14□□□□□ -1.43
H3F3AP84243 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
H3F3AP84243 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
H3F3AP84243 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
H3F3AP84243 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
H3F3AP84243 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
H3F3AP84243 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
H3F3AP84243 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
H3F3AP84243 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
H3F3AP84243 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
H3F3AP84243 RNA5SP176-201ENST00000390956 110 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 RPSAP60-201ENST00000415403 880 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.14□□□□□ -1.43
H3F3AP84243 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.14□□□□□ -1.43
H3F3AP84243 AL645936.2-201ENST00000430565 928 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
H3F3AP84243 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.14□□□□□ -1.43
H3F3AP84243 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.14□□□□□ -1.43
H3F3AP84243 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.14□□□□□ -1.43
H3F3AP84243 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.14□□□□□ -1.43
H3F3AP84243 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.14□□□□□ -1.43
H3F3AP84243 AL356133.1-201ENST00000444762 372 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.14□□□□□ -1.43
H3F3AP84243 ST13P21-201ENST00000453250 1098 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 RN7SL492P-201ENST00000460700 295 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.14□□□□□ -1.43
H3F3AP84243 AC114940.1-201ENST00000512162 1265 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.14□□□□□ -1.43
H3F3AP84243 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
H3F3AP84243 RN7SL42P-201ENST00000579786 294 ntBASIC6.14□□□□□ -1.43
H3F3AP84243 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.14□□□□□ -1.43
H3F3AP84243 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.14□□□□□ -1.43
H3F3AP84243 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms