Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LMO4P61968 AC245036.1-201ENST00000391727 309 ntBASIC5.61□□□□□ -1.51
LMO4P61968 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 AL139184.1-202ENST00000422303 222 ntBASIC5.61□□□□□ -1.51
LMO4P61968 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO4P61968 OR6R1P-201ENST00000431838 940 ntBASIC5.61□□□□□ -1.51
LMO4P61968 LINC00328-2P-201ENST00000436585 219 ntBASIC5.61□□□□□ -1.51
LMO4P61968 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO4P61968 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.61□□□□□ -1.51
LMO4P61968 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO4P61968 LAPTM4BP1-201ENST00000447781 690 ntBASIC5.61□□□□□ -1.51
LMO4P61968 RPL26P30-201ENST00000453533 435 ntBASIC5.61□□□□□ -1.51
LMO4P61968 RPL7AP23-201ENST00000482625 776 ntBASIC5.61□□□□□ -1.51
LMO4P61968 RPL29P23-201ENST00000486188 442 ntBASIC5.61□□□□□ -1.51
LMO4P61968 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.61□□□□□ -1.51
LMO4P61968 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 PPBPP2-201ENST00000513150 1362 ntBASIC5.61□□□□□ -1.51
LMO4P61968 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LMO4P61968 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC5.61□□□□□ -1.51
LMO4P61968 ANP32BP1-202ENST00000568553 737 ntBASIC5.61□□□□□ -1.51
LMO4P61968 CTSLP2-201ENST00000580501 394 ntBASIC5.61□□□□□ -1.51
LMO4P61968 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO4P61968 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LMO4P61968 AL035425.4-201ENST00000624509 1063 ntBASIC5.61□□□□□ -1.51
LMO4P61968 AC090181.3-201ENST00000624777 1514 ntBASIC5.61□□□□□ -1.51
LMO4P61968 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO4P61968 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 AC005614.1-201ENST00000598952 3653 ntBASIC5.61□□□□□ -1.51
LMO4P61968 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LMO4P61968 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
LMO4P61968 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO4P61968 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 AC020978.6-201ENST00000571197 3177 ntBASIC5.6□□□□□ -1.51
LMO4P61968 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LMO4P61968 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO4P61968 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO4P61968 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 AC010086.1-201ENST00000437359 1052 ntBASIC5.6□□□□□ -1.51
LMO4P61968 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 COL11A2P1-205ENST00000441798 676 ntBASIC5.6□□□□□ -1.51
LMO4P61968 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO4P61968 AC234771.2-201ENST00000445718 597 ntBASIC5.6□□□□□ -1.51
LMO4P61968 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO4P61968 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO4P61968 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO4P61968 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 RN7SL168P-201ENST00000463821 279 ntBASIC5.6□□□□□ -1.51
LMO4P61968 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO4P61968 RN7SL568P-201ENST00000493069 298 ntBASIC5.6□□□□□ -1.51
LMO4P61968 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.6□□□□□ -1.51
LMO4P61968 AC021220.1-201ENST00000507445 630 ntBASIC5.6□□□□□ -1.51
LMO4P61968 GUSBP9-201ENST00000510138 584 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms