Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SUMO3P55854 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.55□□□□□ -1.36
SUMO3P55854 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SUMO3P55854 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SUMO3P55854 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SUMO3P55854 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SUMO3P55854 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SUMO3P55854 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.55□□□□□ -1.36
SUMO3P55854 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SUMO3P55854 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 MFSD8-256ENST00000641949 1640 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 AP000568.1-201ENST00000282964 442 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 SNORA63.3-201ENST00000362682 132 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 FAM204BP-201ENST00000369171 701 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 MIR620-201ENST00000385232 95 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 RPL17P17-201ENST00000419491 557 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.54□□□□□ -1.36
SUMO3P55854 RPS26P4-201ENST00000431743 355 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AL513321.1-201ENST00000441175 761 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SUMO3P55854 RNF2P1-201ENST00000442955 1010 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC002486.2-201ENST00000447806 590 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC104629.2-201ENST00000468627 598 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 RN7SL88P-201ENST00000480166 299 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 RPL23AP73-201ENST00000492507 471 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AC015864.1-201ENST00000496512 544 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.54□□□□□ -1.36
SUMO3P55854 AL135933.1-201ENST00000498657 802 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC111000.1-201ENST00000514545 713 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 RN7SKP157-201ENST00000516174 282 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC6.54□□□□□ -1.36
SUMO3P55854 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.54□□□□□ -1.36
SUMO3P55854 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 AC006120.1-201ENST00000579375 546 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 MIR4470-201ENST00000583453 72 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC006116.7-201ENST00000590141 756 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.54□□□□□ -1.36
SUMO3P55854 ABI1P1-201ENST00000603375 1120 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC113361.1-201ENST00000606683 543 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AL391834.2-201ENST00000609982 546 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 CR589904.2-201ENST00000612533 440 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SUMO3P55854 AC016542.3-201ENST00000623520 619 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 OR7E161P-202ENST00000641994 1033 ntBASIC6.54□□□□□ -1.36
SUMO3P55854 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.54□□□□□ -1.36
SUMO3P55854 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.54□□□□□ -1.36
SUMO3P55854 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SUMO3P55854 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
SUMO3P55854 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SUMO3P55854 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 AC120036.2-201ENST00000509729 1474 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 ABCA11P-202ENST00000504019 2110 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 AL359263.1-201ENST00000441188 2796 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.53□□□□□ -1.36
SUMO3P55854 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SUMO3P55854 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SUMO3P55854 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SUMO3P55854 RNU6-1017P-201ENST00000363613 106 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SUMO3P55854 NPM1P31-201ENST00000399021 764 ntBASIC6.53□□□□□ -1.36
SUMO3P55854 CYP4F34P-201ENST00000425951 481 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms