Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 NPM1P14-201ENST00000343743 866 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC090114.1-201ENST00000393266 448 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 RN7SKP271-201ENST00000410528 320 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AL139135.1-201ENST00000412675 209 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AL157698.1-201ENST00000415190 1011 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 MTND1P10-201ENST00000426108 832 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AL604028.2-201ENST00000437848 788 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 RPL36AP55-201ENST00000454114 305 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 RPL34P34-201ENST00000465389 354 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 RPS10P28-201ENST00000480396 498 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 SLC25A51P2-201ENST00000535708 889 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 FXNP1-201ENST00000555153 337 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 SNORA70D-201ENST00000578836 135 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 MIR5010-201ENST00000582846 120 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC012510.1-201ENST00000607946 759 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC131009.3-201ENST00000621809 287 ntBASIC5.25□□□□□ -1.57
HLA-DMBP28068 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HLA-DMBP28068 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DMBP28068 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 KYNUP2-201ENST00000582280 1329 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 MAPK10-344ENST00000641718 3746 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 AC105114.1-201ENST00000624795 1862 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 AC112243.1-201ENST00000623949 3851 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 CDY19P-201ENST00000411668 1613 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 CDY18P-201ENST00000438294 1609 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 AC007406.5-201ENST00000570140 3170 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 RNU4-81P-201ENST00000363561 144 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HLA-DMBP28068 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 CYP4F34P-201ENST00000425951 481 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 AC019080.2-201ENST00000453859 394 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 RPLP0P1-201ENST00000457002 361 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 WBP1LP1-201ENST00000460451 896 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 CREM-242ENST00000490511 469 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 RN7SL776P-201ENST00000493390 268 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 SCARNA6-201ENST00000515982 265 ntBASIC5.24□□□□□ -1.57
HLA-DMBP28068 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.24□□□□□ -1.57
HLA-DMBP28068 OXR1-212ENST00000521592 993 ntTSL 5 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms