Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC2P18074 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERCC2P18074 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERCC2P18074 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC074375.1-201ENST00000372993 192 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC091492.1-201ENST00000419844 272 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 YWHAZP5-201ENST00000419975 730 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC2P18074 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC2P18074 RN7SL492P-201ENST00000460700 295 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 OR10J9P-201ENST00000511932 987 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC2P18074 AP004607.5-201ENST00000532034 217 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 MIR378H-201ENST00000579966 83 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC091768.1-201ENST00000609258 930 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC2P18074 AC120057.5-201ENST00000623840 154 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 SNORA16A-202ENST00000628458 135 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC2P18074 AL034408.1-201ENST00000637712 664 ntBASIC7.04□□□□□ -1.28
ERCC2P18074 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC2P18074 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERCC2P18074 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
ERCC2P18074 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC2P18074 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC2P18074 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC2P18074 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 AC096992.2-201ENST00000609553 1684 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC2P18074 AC092821.2-201ENST00000545710 2042 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC2P18074 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC2P18074 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.03□□□□□ -1.28
ERCC2P18074 AC110597.1-201ENST00000562669 3176 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 NPM1P14-201ENST00000343743 866 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 MIR138-2-201ENST00000384916 84 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 MIR27A-201ENST00000385073 78 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 MIR640-201ENST00000385086 96 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 RNA5SP231-201ENST00000410496 138 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 AC092646.1-201ENST00000427142 901 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC2P18074 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC2P18074 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 RPL36AP55-201ENST00000454114 305 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 PFN2-213ENST00000494827 793 ntTSL 4 BASIC7.03□□□□□ -1.28
ERCC2P18074 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC7.03□□□□□ -1.28
ERCC2P18074 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC2P18074 AC114940.1-201ENST00000512162 1265 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC2P18074 RBMS2P1-201ENST00000525031 1226 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC2P18074 SETP3-201ENST00000581726 813 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC2P18074 AL512430.4-201ENST00000603085 613 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 AC013731.1-201ENST00000604340 883 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 MIR8082-201ENST00000612488 81 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 AC027506.1-201ENST00000621395 198 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 AC025287.2-201ENST00000621911 668 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 AC009950.2-201ENST00000636548 183 ntBASIC7.03□□□□□ -1.28
ERCC2P18074 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC2P18074 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
ERCC2P18074 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC2P18074 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ERCC2P18074 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms