Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
HMGB1P09429 RMST_5.1-201ENST00000618704 126 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 AC078909.2-201ENST00000620584 398 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 AC211433.3-201ENST00000623770 375 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.51□□□□□ -1.05
HMGB1P09429 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
HMGB1P09429 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
HMGB1P09429 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC8.51□□□□□ -1.05
HMGB1P09429 AL049869.1-201ENST00000556933 1402 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 AL359396.1-201ENST00000623151 2376 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HMGB1P09429 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HMGB1P09429 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HMGB1P09429 BX322650.1-201ENST00000332359 2143 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMGB1P09429 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMGB1P09429 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HMGB1P09429 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
HMGB1P09429 MRPS17P1-201ENST00000596009 3130 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
HMGB1P09429 MAPK10-287ENST00000641217 3037 ntBASIC8.51□□□□□ -1.05
HMGB1P09429 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.51□□□□□ -1.05
HMGB1P09429 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.5□□□□□ -1.05
HMGB1P09429 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMGB1P09429 AC007342.5-201ENST00000571340 2142 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.5□□□□□ -1.05
HMGB1P09429 RNA5SP427-201ENST00000365323 119 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMGB1P09429 MIR7-1-201ENST00000384871 110 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 MT-RNR1-201ENST00000389680 954 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMGB1P09429 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMGB1P09429 SNORA79B-201ENST00000410557 148 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC8.5□□□□□ -1.05
HMGB1P09429 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 ZNF92P1Y-201ENST00000415010 1191 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 RPL17P17-201ENST00000419491 557 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC8.5□□□□□ -1.05
HMGB1P09429 OR5P4P-201ENST00000424698 917 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 CYP4F32P-201ENST00000426492 504 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 MTCO1P45-201ENST00000431457 267 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
HMGB1P09429 SNX18P9-201ENST00000440580 835 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 AL139135.2-201ENST00000445040 433 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 PRDX1P1-201ENST00000449329 596 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 AC093799.1-201ENST00000452411 499 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 RPSAP7-201ENST00000456871 885 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 RN7SL325P-201ENST00000460434 283 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 RN7SL160P-201ENST00000468558 284 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 AC104629.2-201ENST00000468627 598 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC8.5□□□□□ -1.05
HMGB1P09429 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 AL135786.2-201ENST00000608422 615 ntBASIC8.5□□□□□ -1.05
HMGB1P09429 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.5□□□□□ -1.05
HMGB1P09429 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMGB1P09429 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
HMGB1P09429 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC8.5□□□□□ -1.05
HMGB1P09429 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HMGB1P09429 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.49□□□□□ -1.05
HMGB1P09429 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
HMGB1P09429 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC8.49□□□□□ -1.05
HMGB1P09429 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC8.49□□□□□ -1.05
HMGB1P09429 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
HMGB1P09429 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC8.49□□□□□ -1.05
HMGB1P09429 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HMGB1P09429 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
HMGB1P09429 FAM204BP-201ENST00000369171 701 ntBASIC8.49□□□□□ -1.05
HMGB1P09429 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
HMGB1P09429 RPL12P1-201ENST00000374520 498 ntBASIC8.49□□□□□ -1.05
HMGB1P09429 AL590762.1-201ENST00000391782 432 ntBASIC8.49□□□□□ -1.05
HMGB1P09429 DSTNP5-201ENST00000427921 523 ntBASIC8.49□□□□□ -1.05
HMGB1P09429 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms