Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.3□□□□□ -1.4
SPTA1P02549 AC140063.1-201ENST00000541343 259 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.3□□□□□ -1.4
SPTA1P02549 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 AL135999.3-201ENST00000610501 812 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SPTA1P02549 RBBP4P5-201ENST00000398583 1266 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 HMGN1P20-201ENST00000411849 300 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.3□□□□□ -1.4
SPTA1P02549 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 AP006245.2-201ENST00000522004 300 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 AP004607.6-201ENST00000525033 1202 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.3□□□□□ -1.4
SPTA1P02549 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
SPTA1P02549 AC048383.1-201ENST00000558226 527 ntTSL 4 BASIC6.3□□□□□ -1.4
SPTA1P02549 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.3□□□□□ -1.4
SPTA1P02549 AL078601.3-201ENST00000573303 535 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 AC005514.1-201ENST00000623521 208 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SPTA1P02549 OR7E25P-202ENST00000641088 5937 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC6.3□□□□□ -1.4
SPTA1P02549 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.3□□□□□ -1.4
SPTA1P02549 AC018688.1-201ENST00000636528 1754 ntBASIC6.3□□□□□ -1.4
SPTA1P02549 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SPTA1P02549 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 AC110769.2-201ENST00000602760 1548 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SPTA1P02549 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 AL022100.1-202ENST00000421214 548 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
SPTA1P02549 RPL23AP19-201ENST00000436229 369 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.29□□□□□ -1.4
SPTA1P02549 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC6.29□□□□□ -1.4
SPTA1P02549 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 GLUD1P8-201ENST00000585063 203 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.29□□□□□ -1.4
SPTA1P02549 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 MIR6748-201ENST00000610433 71 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AP005431.1-201ENST00000618479 319 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AC073488.3-201ENST00000631611 778 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SPTA1P02549 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SPTA1P02549 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 AP000766.1-201ENST00000561746 4140 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 AC007394.1-201ENST00000421941 531 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.29□□□□□ -1.4
SPTA1P02549 PFN1P11-201ENST00000445829 389 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.29□□□□□ -1.4
SPTA1P02549 SNORA81.1-201ENST00000458922 177 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 RN7SL799P-201ENST00000475891 298 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 PPP1R2P6-201ENST00000478565 588 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 RPL32P9-201ENST00000487963 407 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 UGT2B29P-201ENST00000509021 973 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.29□□□□□ -1.4
SPTA1P02549 NPIPB14P-203ENST00000532298 987 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 ACTG1P15-201ENST00000570019 1063 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.29□□□□□ -1.4
SPTA1P02549 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.29□□□□□ -1.4
SPTA1P02549 AC124916.2-201ENST00000604416 224 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AC092944.2-201ENST00000605443 889 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 AC061999.1-201ENST00000624454 177 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms