Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
AP1S3Q96PC3 ASNSP6-201ENST00000592770 1618 ntBASIC5.15□□□□□ -1.59
AP1S3Q96PC3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
AP1S3Q96PC3 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC5.15□□□□□ -1.59
AP1S3Q96PC3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.15□□□□□ -1.59
AP1S3Q96PC3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
AP1S3Q96PC3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.15□□□□□ -1.59
AP1S3Q96PC3 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
AP1S3Q96PC3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 CREM-216ENST00000429130 1476 ntTSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 OGFOD1P1-201ENST00000447552 1592 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 SNORA73B-201ENST00000363217 204 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 TMED5-201ENST00000370280 750 ntTSL 2 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 RPL23AP34-201ENST00000423483 410 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 LINC01284-201ENST00000442994 730 ntTSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 SDHCP3-201ENST00000445371 506 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC114755.1-201ENST00000453101 868 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC022730.2-201ENST00000465359 452 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 RN7SL368P-201ENST00000473384 277 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 ACTG1P20-201ENST00000486001 468 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 RN7SL702P-201ENST00000488394 292 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AF186996.3-201ENST00000509527 964 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 SOX5-213ENST00000541847 758 ntTSL 3 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC092375.1-201ENST00000550410 637 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 SNORA70D-201ENST00000578836 135 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 MIR3689F-201ENST00000579617 66 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 GTF2IP6-201ENST00000583143 541 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 PRR13P5-201ENST00000596581 442 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC091193.1-201ENST00000604640 448 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AL136141.1-201ENST00000605780 369 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC131009.3-201ENST00000621809 287 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC093909.6-201ENST00000624757 775 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AC137056.2-201ENST00000624055 1958 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 GNRH1-201ENST00000276414 1760 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP1S3Q96PC3 SAMMSON-203ENST00000641005 2168 ntBASIC5.14□□□□□ -1.59
AP1S3Q96PC3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC011455.2-201ENST00000599320 3336 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 TAS2R7-201ENST00000240687 1096 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 FAM204BP-201ENST00000369171 701 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 RNU11-201ENST00000387069 134 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 RN7SKP271-201ENST00000410528 320 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 RN7SKP168-201ENST00000410910 300 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 RPL6P2-201ENST00000425480 783 ntBASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC5.13□□□□□ -1.59
AP1S3Q96PC3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms