Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RNU1-38P-201ENST00000362817 144 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SKP76-201ENST00000364419 323 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SKP47-201ENST00000365347 328 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC017078.1-201ENST00000416146 368 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 CYP2C56P-201ENST00000440076 291 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC093799.1-201ENST00000452411 499 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 TAAR3P-201ENST00000466706 1078 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RPL23AP8-201ENST00000479812 475 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SL306P-201ENST00000492941 296 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 SNORA58-201ENST00000505219 137 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC006070.1-201ENST00000508151 193 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SL155P-201ENST00000581538 263 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AL953862.2-201ENST00000603089 820 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 RPS28P1-201ENST00000604589 187 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AP001885.1-201ENST00000621658 558 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 MIR6723-201ENST00000621981 89 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC079456.1-201ENST00000624010 480 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AC022034.1-201ENST00000512867 2156 ntBASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC71LQ8N9Z2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 MTHFD1P1-201ENST00000413059 2764 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 CREM-218ENST00000460270 1416 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 WFDC8-201ENST00000289953 1069 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 RNA5SP483-201ENST00000363431 118 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 SNORA70H-201ENST00000383910 135 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 SNORA70J-201ENST00000384182 135 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 MIR152-201ENST00000385212 87 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SKP89-201ENST00000410774 242 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC130472.1-201ENST00000427885 309 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 LSM3P3-201ENST00000436601 306 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC108039.2-201ENST00000440214 359 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AP006193.1-201ENST00000440724 485 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC009237.4-201ENST00000441078 238 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 BX323845.2-201ENST00000458382 234 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SL688P-201ENST00000471754 275 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 PPP1R11P1-201ENST00000486095 376 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SL561P-201ENST00000488553 281 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 RN7SL775P-201ENST00000498361 336 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 HMGN2P47-201ENST00000559378 272 ntBASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC71LQ8N9Z2 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms